| Gene: 5830404H04Rik | ID: uc008ads.1_intron_5_0_chr16_98098840_r.3p | SPECIES: mm9 |
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(7) OTHER.mut |
(16) TESTES |
| TGATGCAGTTCTACACCCTATGTGCTTTGGATATGGCCTTTGGCAGGCCTGGCATGTAGCCCCATTCCCTCTGGAATGCCCACAACCTCTTTATGTTTTATGTTTGGTGATACTAACACTGTGTAGTGAACCTAACGGAACCCCCCTTGGGGTGTGAGACTGGAAACATCACCATTGTTCTTTCTTGTCTTCCACTCTAGGTCTGTTGGGGATAGCAACCATTCACCTGGACCTATTTAGGAAGCAGCCT ...................................................................................................................................................(((((((..((((.(((((...((....))...))))).))))..)))))))................................................... .............................................................................................................................................142.......................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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| ....................................................................................................................................................................................TTTCTTGTCTTCCACTCTAGa................................................. | 21 | a | 11.00 | 2.00 | 1.00 | - | 4.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | 1.00 | - |
| ..................................................................................................................................................TTGGGGTGTGAGACTGGAAA.................................................................................... | 20 | 1 | 5.00 | 5.00 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TTGGGGTGTGAGACTGGAAACA.................................................................................. | 22 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTCTTGTCTTCCACTCTAGt................................................. | 21 | t | 3.00 | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................TTTCTTGTCTTCCACTCTAG.................................................. | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................TTGGGGTGTGAGACTGGAAAC................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTCTTGTCTTCCACTCTAGta................................................ | 22 | ta | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGTCTGTTGGGGATAGCAACCATT........................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................TTGGGGTGTGAGACTGGAAACt.................................................................................. | 22 | t | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................CTTGGGGTGTGAGACTGGAA..................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGGGGTGTGAGACTGGAAtc................................................................................... | 20 | tc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| TGATGCAGTTCTACACCCTATGTGCTTTGGATATGGCCTTTGGCAGGCCTGGCATGTAGCCCCATTCCCTCTGGAATGCCCACAACCTCTTTATGTTTTATGTTTGGTGATACTAACACTGTGTAGTGAACCTAACGGAACCCCCCTTGGGGTGTGAGACTGGAAACATCACCATTGTTCTTTCTTGTCTTCCACTCTAGGTCTGTTGGGGATAGCAACCATTCACCTGGACCTATTTAGGAAGCAGCCT ...................................................................................................................................................(((((((..((((.(((((...((....))...))))).))))..)))))))................................................... .............................................................................................................................................142.......................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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