| Gene: Donson | ID: uc007zyc.1_intron_5_0_chr16_91684057_r | SPECIES: mm9 |
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(1) OTHER.ip |
(2) OTHER.mut |
(4) PIWI.ip |
(3) PIWI.mut |
(21) TESTES |
| AGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTAAGCTAGCCCAGTCCAGAGGTGAGCCTGCGGGAGCAGGCAGGACGCTGCTGGTGGCTGGGTGTCAGCAGAAGGGCTGATGCTGAGTAGCTTTCTGTGTTTGTGGACGTTGTCAGACACGCAGTGACCAGGACTTACATTTGCTTTTTCCCGACTTGATCATTATCAGCTGTGTAGTACACAGTGTATAACGGATGTCCTGGACAAACAGCAAAAGGTAAGGCTTCCAGCTTCTTGTCAGTTGATGCTTTCTCATCAGAAGTTGTTCATGGTTAGGGACCAGGTAAAAACTGCTTGAAAGAACATCTGCAGCCCTCAAATGCAAAATTACACAACTTCAGAAACTCAACACAGTATTTGAAATGTTGGGTTTTTATCTACATGTTAGAATAAAAGAAATTAATTATTAATTAATTAAATTATTAATTAAATTAATTCAGAATTGAATTTAAAATATTGTAACACCTGAAAAACCTTCCTTTCTTCCTAGGTCTGTGAGTTTCACATCTCTGTATAACCTGCTGAAGACAAAGCTTTGTC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................................................................TGGACAAACAGCAAAAG................................................................................................................................................................................................................................................................................................................................... | 17 | 1 | 12.00 | 12.00 | 7.00 | - | - | - | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTATAACCTGCTGAAGACAAAGCT..... | 29 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTATAACCTGCTGAAGACAAAGCT..... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGTATAACCTGCTGAAGACAAAGCTT.... | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................ACGGATGTCCTGGACAAACAGCAAAAGG.................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGAGTAGCTTTCTGTGTTTGTGGACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................TAACGGATGTCCTGGACAAACAGCAAAAGGTAA............................................................................................................................................................................................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAACCTGCTGAAGACAAAGCTT.... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................ACGGATGTCCTGGACAAACAGCAAAAGGT................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................CGGATGTCCTGGACAAACAGCAAAAGG.................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACCTGCTGAAGACAAAGCTTTGTC | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................AACCCTGCAGCATGCTTTAATGAGCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................................................AACGGATGTCCTGGACAAACAGCA....................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACATCTCTGTATAACCTGCTGAAGAC........... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTATAACCTGCTGAAGACAAAGCTT.... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................CGGATGTCCTGGACAAACAGCAAAAGGT................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................ATGAGCGACTGGTAAGCTcccc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 22 | cccc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATCTCTGTATAACCTGCTGAAGACAAA........ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACATCTCTGTATAACCTGCTGAAGAC........... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................ACGGATGTCCTGGACAAACAGCAAAAG................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCTGTGTTTGTGGACGTTGTCAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACATCTCTGTATAACCTGCTGAAGACA.......... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................GGATGTCCTGGACAAACAGCAAAAG................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGTATAACCTGCTGAAGAC........... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................................................................................AACGGATGTCCTGGACAAACAGCAAA..................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTATAACCTGCTGAAG............. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................CAGCAGAAGGGCTGATGCTGAGTAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................AGACACGCAGTGACCAGGACTTAa.................................................................................................................................................................................................................................................................................................................................................................................................................. | 24 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGGACGTTGTCAGACACGCAGTGACCAGGACT..................................................................................................................................................................................................................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTAAGCTAGCCCAGTCCAGAGGTGAGCCTGCGGGAGCAGGCAGGACGCTGCTGGTGGCTGGGTGTCAGCAGAAGGGCTGATGCTGAGTAGCTTTCTGTGTTTGTGGACGTTGTCAGACACGCAGTGACCAGGACTTACATTTGCTTTTTCCCGACTTGATCATTATCAGCTGTGTAGTACACAGTGTATAACGGATGTCCTGGACAAACAGCAAAAGGTAAGGCTTCCAGCTTCTTGTCAGTTGATGCTTTCTCATCAGAAGTTGTTCATGGTTAGGGACCAGGTAAAAACTGCTTGAAAGAACATCTGCAGCCCTCAAATGCAAAATTACACAACTTCAGAAACTCAACACAGTATTTGAAATGTTGGGTTTTTATCTACATGTTAGAATAAAAGAAATTAATTATTAATTAATTAAATTATTAATTAAATTAATTCAGAATTGAATTTAAAATATTGTAACACCTGAAAAACCTTCCTTTCTTCCTAGGTCTGTGAGTTTCACATCTCTGTATAACCTGCTGAAGACAAAGCTTTGTC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAATTCAGAATTggta................................................................................................ | 18 | ggta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................................................................................................................................................................................TCTCATCAGAAGTTG................................................................................................................................................................................................................................................................................... | 15 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - |