(1)
OTHER.ip
(4)
OTHER.mut
(7)
PIWI.ip
(3)
PIWI.mut
(31)
TESTES

Sense strand
CCGGACGCCTCTAGGTGAGACAGAAGCCAAACAGGAGGAGGAAGTGGAGGGTAAGTGCTTCCGGGTCCCTCAGCTAAGACTCCGCCATCTTTCCTACACTTTAACTTCACCCCCTTTTCCCTCTTGGAGACACTGCACTGTACGCATGCGTATTCTGGCCTGTCCCCTAGTTCAAGCTCCCTTCGGAGTCAGCGTCCCGATCCTTGGGGTTGGGGAGGTGGATGTAGGGTGGGGGTACAAAGGAGCGCGT


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
.................................................................................................................................................................................................................TTGGGGAGGTGGATGTAG....................... 18 1 6.00 6.00 6.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................TCCCTCTTGGAGACACTGCACTGTACGC......................................................................................................... 28 1 5.00 5.00 - - - - - - - 2.00 - - - - 3.00 - - - - - - - - - - - - - - - - - -
..........................................................................................................................CTTGGAGACACTGCACTG.............................................................................................................. 18 1 4.00 4.00 - - - - - 4.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........TAGGTGAGACAGAAGCCAAACAGGAGG.................................................................................................................................................................................................................... 27 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................TTCTGGCCTGTCCCCTAGTTCAAGCTC....................................................................... 27 1 2.00 2.00 - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................GAGACACTGCACTGTACGCATG...................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................AACAGGAGGAGGAAGTGGAGGGactg................................................................................................................................................................................................... 26 actg 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................CCCTCTTGGAGACACTGCA................................................................................................................. 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...........................CAAACAGGAGGAGGAAGTGGAGGGa...................................................................................................................................................................................................... 25 a 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................ACACTTTAACTTCACCCCCTT...................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...........................CAAACAGGAGGAGGAAGTGGAGGGac..................................................................................................................................................................................................... 26 ac 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................TCGGAGTCAGCGTCCCGATCCTTGG........................................... 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................AGGAAGTGGAGGGTAAGTG................................................................................................................................................................................................. 19 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................CTGCACTGTACGCATGCGTATTCTGGCCT......................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...........................................................................................................................TTGGAGACACTGCACTGTACGCATGC..................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
....................................................................................................................................................................................................CCGATCCTTGGGGTTGGGGAGGTGGATGTAG....................... 31 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.................................GGAGGAGGAAGTGGAGGGactg................................................................................................................................................................................................... 22 actg 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................................................................................................CACTGCACTGTACGCA........................................................................................................ 16 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................TTCTGGCCTGTCCCCTAGTTCAAGCT........................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.CGGACGCCTCTAGGTGAGACAGA.................................................................................................................................................................................................................................. 23 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................AGACACTGCACTGTACG.......................................................................................................... 17 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................CCCTCTTGGAGACACTGCACTGTACGCAT....................................................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................AAACAGGAGGAGGAAGTG............................................................................................................................................................................................................ 18 3 0.33 0.33 - - - - - - 0.33 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................TTGGGGTTGGGGAGGTGG............................. 18 3 0.33 0.33 - - - - - - - - - 0.33 - - - - - - - - - - - - - - - - - - - - -

Antisense strand
CCGGACGCCTCTAGGTGAGACAGAAGCCAAACAGGAGGAGGAAGTGGAGGGTAAGTGCTTCCGGGTCCCTCAGCTAAGACTCCGCCATCTTTCCTACACTTTAACTTCACCCCCTTTTCCCTCTTGGAGACACTGCACTGTACGCATGCGTATTCTGGCCTGTCCCCTAGTTCAAGCTCCCTTCGGAGTCAGCGTCCCGATCCTTGGGGTTGGGGAGGTGGATGTAGGGTGGGGGTACAAAGGAGCGCGT


Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesWT3()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
...................................................................................GCCATCTTTCCTACACTTTAACTTCA............................................................................................................................................. 26 1 16.00 16.00 16.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................CGCCATCTTTCCTACACTTTAACTTC.............................................................................................................................................. 26 1 8.00 8.00 - 3.00 1.00 1.00 2.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................GACTCCGCCATCTTTCCTACACTTTA................................................................................................................................................... 26 1 6.00 6.00 - 3.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
................................................................................TCCGCCATCTTTCCTACACTTTAACT................................................................................................................................................ 26 1 4.00 4.00 - - 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................AGACTCCGCCATCTTTCCTACACTTTA................................................................................................................................................... 27 1 3.00 3.00 - 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................................CGTATTCTGGCCTGTCCCCTAGTTCA............................................................................ 26 1 2.00 2.00 - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................................CCGCCATCTTTCCTACACTTTAACTT............................................................................................................................................... 26 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................AAGACTCCGCCATCTTTCCTACACTT..................................................................................................................................................... 26 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................CGCCATCTTTCCTACACTTTAACTTCAC............................................................................................................................................ 28 1 2.00 2.00 - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
................................................................................TCCGCCATCTTTCCTACACTTTAACTT............................................................................................................................................... 27 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................GACTCCGCCATCTTTCCTA.......................................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.................................................................................CCGCCATCTTTCCTACACTTTAACT................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...................................................................................................................................................CGTATTCTGGCCTGTCCCCTAGTTCAAt........................................................................... 28 t 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................CTGTCCCCTAGTTCAAGCTCCCTTC.................................................................. 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.................................................................................CCGCCATCTTTCCTACACTTTAACTTC.............................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................AAGACTCCGCCATCTTTCCTACACTTTAt................................................................................................................................................... 29 t 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................TCAGCTAAGACTCCGCCATCTTTCCT........................................................................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................AGACTCCGCCATCTTTCCTACACTTT.................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................ACTCCGCCATCTTTCCTACACTTTA................................................................................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................TGCGTATTCTGGCCTGTCCCCTAGTTCA............................................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................................TTTAACTTCACCCCCTTTTCCCTCTT............................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..................................................GTAAGTGCTTCCGGGTCCCTCAGCTAAGACTC........................................................................................................................................................................ 32 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
....................................................................................................................................................GTATTCTGGCCTGTCCCCTAGTTCAa............................................................................ 26 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
....................................................................................CCATCTTTCCTACACTTTAACTTCA............................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...................................................................................GCCATCTTTCCTACACTTTAACTTC.............................................................................................................................................. 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTAAGTGCTTCCGGGTCCCTCAGCTA.............................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
................................................................................................................................................CATGCGTATTCTGGCCTGTCCCCTAGTTCA............................................................................ 30 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................GCGTATTCTGGCCTGTCCCCTAGTTCAA........................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................CCCCCTTTTCCCTCTTGGAGACAC..................................................................................................................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................AAGTGCTTCCGGGTCCCTCAGCTAA............................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.................................................................................CCGCCATCTTTCCTACACTTTA................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TTCTGGCCTGTCCCCTAGTTCAgac............................................................................ 25 gac 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................GCCTGTCCCCTAGTTCAAGCTCCCT.................................................................... 25 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................TCAGCTAAGACTCCGCCATCTTTCCTA.......................................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................TCAGCGTCCCGATCCTTGG........................................... 19 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..........................................................................TAAGACTCCGCCATCTTTCCTACACT...................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................GAAGTGGAGGGTAAGTGCTTCCGGGTCCCT.................................................................................................................................................................................... 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................TGCGTATTCTGGCCTGTCCCCTAGTTCAA........................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................AAGACTCCGCCATctg.................................................................................................................................................................. 16 ctg 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................TTTTCCCTCTTGGAGACACTGCACTG.............................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..............................................................................................................................GAGACACTGCACTGTACGCA........................................................................................................ 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...............................................................................................................................................................CTGTCCCCTAGTTCAAGCTCCC..................................................................... 22 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................................................................CCATCTTTCCTACACTTT.................................................................................................................................................... 18 2 0.50 0.50 - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - -
....................................................................................CCATCTTTCCTACACT...................................................................................................................................................... 16 5 0.20 0.20 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.20