| Gene: Sidt1 | ID: uc007zhd.1_intron_16_0_chr16_44282002_r.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(11) TESTES |
| GATCTTTTCAGGTCGTCACTACAAAGCTACTTGTGGGTAGCATCCCAGTGGCCTCCCACAGTGCTCAGCTCCAGTGACATATTATTGGGATTTAAGAATGGATGTGATGGAAGCTGATCGATCTTATAAGCGGTGCTGTCCCCAACACAGTCCTCCTATTTCCAAGGACAAGCTGACCAAAGCTGTTTCTCTCTCCTCAGAATCTGTATATGTGAAATCTAGTCTTTTCAGCATATTCGTTTTCTTGTCC ......................................................................................................((((.(((.(((..((((..........)))))))....))).))))(((((..........))))).((((......)))).................................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ..................................................................................................TGGATGTGATGGAAGCTGATC................................................................................................................................... | 21 | 1 | 30.00 | 30.00 | 13.00 | 11.00 | - | 3.00 | 1.00 | 1.00 | - | - | - | 1.00 | - |
| ..................................................................................................TGGATGTGATGGAAGCTGATCG.................................................................................................................................. | 22 | 1 | 8.00 | 8.00 | 1.00 | 3.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | 1.00 |
| ..................................................................................................TGGATGTGATGGAAGCTGATCGA................................................................................................................................. | 23 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................GGATGTGATGGAAGCTGATC................................................................................................................................... | 20 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - |
| ...CTTTTCAGGTCGgtgt....................................................................................................................................................................................................................................... | 16 | gtgt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TGGAAGCTGATCGtcaa.............................................................................................................................. | 17 | tcaa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TGGATGTGATGGAAGCTGATCGATC............................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................TGGATGTGATGGAAGCTGATCGAT................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................GGATGTGATGGAAGCTGATCG.................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................TGGATGTGATGGAAGC........................................................................................................................................ | 16 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - |
| GATCTTTTCAGGTCGTCACTACAAAGCTACTTGTGGGTAGCATCCCAGTGGCCTCCCACAGTGCTCAGCTCCAGTGACATATTATTGGGATTTAAGAATGGATGTGATGGAAGCTGATCGATCTTATAAGCGGTGCTGTCCCCAACACAGTCCTCCTATTTCCAAGGACAAGCTGACCAAAGCTGTTTCTCTCTCCTCAGAATCTGTATATGTGAAATCTAGTCTTTTCAGCATATTCGTTTTCTTGTCC ......................................................................................................((((.(((.(((..((((..........)))))))....))).))))(((((..........))))).((((......)))).................................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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