| Gene: Tbx1 | ID: uc007yog.1_intron_5_0_chr16_18585230_r.3p | SPECIES: mm9 |
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(4) PIWI.ip |
(2) PIWI.mut |
(12) TESTES |
| AGGGACCTGAGGCCTGACCTATTGCTGCCTTGCCCAGGGTTGGATAAGGGCCTACTTGAGATTAGAGAGCCAAGAAAGCAGCTTAAAGAGAGACCTGAAGGAAGGGCTGAGCTAGGGGCTGCCTGGCCAGAGAAGTTAAAGTGGAGAGTGTTCCTGTACTCCCCTACCTGAGGGACCTGACCTCCCTACCCCATCCCCAGACGAATGTTCCCCACGTTCCAAGTGAAGCTTTTTGGAATGGATCCCATGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................TGAGATTAGAGAGCCAAGAAAGCAGCTT...................................................................................................................................................................... | 28 | 1 | 6.00 | 6.00 | 3.00 | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - |
| ........................................................TGAGATTAGAGAGCCAAGAAAGCAGCT....................................................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ........................................................TGAGATTAGAGAGCCAAGAAAGCAGC........................................................................................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | 1.00 |
| ..................................................................................TTAAAGAGAGACCTGAAGGAAGGGCT.............................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CAGGGTTGGATAAGGtgaa..................................................................................................................................................................................................... | 19 | tgaa | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| .......................................................TTGAGATTAGAGAGCCAAGAAAGCAGC........................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................GAGCCAAGAAAGCAGCTactg................................................................................................................................................................... | 21 | actg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................CAGGGTTGGATAAGGagaa..................................................................................................................................................................................................... | 19 | agaa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................TGAAGGAAGGGCTGAGCTAGGGGCT.................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................TGGATAAGGGCCTACTTGAGATTAG......................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................TTGAGATTAGAGAGCCAAGAAAGCAG......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................TACTTGAGATTAGAGAGCCAAGAAAGCAGC........................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| AGGGACCTGAGGCCTGACCTATTGCTGCCTTGCCCAGGGTTGGATAAGGGCCTACTTGAGATTAGAGAGCCAAGAAAGCAGCTTAAAGAGAGACCTGAAGGAAGGGCTGAGCTAGGGGCTGCCTGGCCAGAGAAGTTAAAGTGGAGAGTGTTCCTGTACTCCCCTACCTGAGGGACCTGACCTCCCTACCCCATCCCCAGACGAATGTTCCCCACGTTCCAAGTGAAGCTTTTTGGAATGGATCCCATGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................GCTGCCTGGCCAGAGAAGTTAAAGTGGA......................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TGCCTGGCCAGAGAAGTTAAAGTGGA......................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |