| Gene: Pik4ca | ID: uc007ykq.1_intron_2_0_chr16_17281203_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(16) TESTES |
| CCCAAATGCTATTGTAGCTAACACCAAACAGAGCATCTTTGAAACCCCTGCTGGAAGCCTGGCATAGTGGGGAGATCACTCAGCCATATAGTGCTATATGTGGTCCTGCTAGCAGATTGTATGGAGAAGTGGCAGCTGGACCACAGGTTCTGTGAGCAGGGTACCTCACACTGTTTGTCCCCCACCCTCTGTCTCCACAGCCCCTATATGGATGCAGTCGTCTCCCTGGTTACACTCATGTTGGACACAG .........................................................................................................(((....)))......((((((((.((.....((((.((((....((((((........))))))))))..)))).....)).)).))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................ATGGAGAAGTGGCAGCTGGACCACAG........................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ATGGAGAAGTGGCAGCTGGACCACAGG....................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................TGGAGAAGTGGCAGCTGGACCACAGGT...................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TATATGGATGCAGTCGTCTCCCTGG..................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................TATGGAGAAGTGGCAGCTGGACCACAGGT...................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................AGCAGATTGTATagtt............................................................................................................................ | 16 | agtt | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TGGAGAAGTGGCAGCTGGACCACAGG....................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................TATGGAGAAGTGGCAGCTGGACCACAGG....................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................GGAGAAGTGGCAGCTGGACCACAGGTT..................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................GTATGGAGAAGTGGCAGCTGGACCACAGGT...................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ATGGAGAAGTGGCAGCTGGACCACAGGT...................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ATGGAGAAGTGGCAGCTGGACCACAGGgt..................................................................................................... | 29 | gt | 1.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TGGAGAAGTGGCAGCTGGACa............................................................................................................ | 21 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................TGGAGAAGTGGCAGCTGGACCACAGGg...................................................................................................... | 27 | g | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TGGAGAAGTGGCAGCTGGACCACAGGTTCTG.................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................ATGGATGCAGTCGTCTCCCT....................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| CCCAAATGCTATTGTAGCTAACACCAAACAGAGCATCTTTGAAACCCCTGCTGGAAGCCTGGCATAGTGGGGAGATCACTCAGCCATATAGTGCTATATGTGGTCCTGCTAGCAGATTGTATGGAGAAGTGGCAGCTGGACCACAGGTTCTGTGAGCAGGGTACCTCACACTGTTTGTCCCCCACCCTCTGTCTCCACAGCCCCTATATGGATGCAGTCGTCTCCCTGGTTACACTCATGTTGGACACAG .........................................................................................................(((....)))......((((((((.((.....((((.((((....((((((........))))))))))..)))).....)).)).))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ....................................................................................................................................CAGCTGGACCACAGGTTCTGT................................................................................................. | 21 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................CCACAGGTTCTGTGAGa.............................................................................................. | 17 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |