| Gene: BC058760 | ID: uc007ykp.1_intron_1_0_chr16_17277495_f | SPECIES: mm9 |
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(1) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) TDRD1.ip |
(13) TESTES |
| GGACAGAAGAGGCCTGGGCCAGCTTCCAGGAGCAGAGTGGAGTCCTGCAGGTGTGACCCCTCGTTTCTGACAGCGGTTCTCTTTCGAATGCCCTGCGGCCTCGACTCTTTCTTCCTTACTCTCTGACTCGCGATGTAGCGCATCCTCTGCCCTGAATCCCTATTGCCATCCTTCAGGAGCTGCAGGGGAAAGTGATGGAGGCAGCAGCTGCGCTGGAGGCTACGCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................GACAGCGGTTCTCTTTCGAATGCCCTGCGGCCTCGACTCTTTCTTCCTTACT.......................................................................................................... | 52 | 1 | 40.00 | 40.00 | 40.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................GGGGAAAGTGATGGAGGCAGC..................... | 21 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TTACTCTCTGACTCGCGATGTAGCGCATC.................................................................................. | 29 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..............TGGGCCAGCTTCCAGGAGCAGAGTGGAGT....................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TACTCTCTGACTCGCGATGTAGCGCATC.................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................................GTAGCGCATCCTCTGagg.......................................................................... | 18 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................................................GATGGAGGCAGCAGCTGCGCTGGAGGC...... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................GATGGAGGCAGCAGCTGCGCTGGAGG....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................TACTCTCTGACTCGCGATGTAGCGCATCC................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................CAGAGTGGAGTCCTGCAG................................................................................................................................................................................ | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| GGACAGAAGAGGCCTGGGCCAGCTTCCAGGAGCAGAGTGGAGTCCTGCAGGTGTGACCCCTCGTTTCTGACAGCGGTTCTCTTTCGAATGCCCTGCGGCCTCGACTCTTTCTTCCTTACTCTCTGACTCGCGATGTAGCGCATCCTCTGCCCTGAATCCCTATTGCCATCCTTCAGGAGCTGCAGGGGAAAGTGATGGAGGCAGCAGCTGCGCTGGAGGCTACGCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | mjTestesWT3() Testes Data. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................GCCATCCTTCAGGActat................................................ | 18 | ctat | 2.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................CCTCGTTTCTGACAGCGGTTCTCTT............................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................TCGTTTCTGACAGCGGTTCTCTTTCGAa........................................................................................................................................... | 28 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................CGTTTCTGACAGCGGTTCTCTTTCGA........................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |