| Gene: 2610318N02Rik | ID: uc007yka.1_intron_5_0_chr16_17121645_r.3p | SPECIES: mm9 |
|
|
(3) OTHER.mut |
(6) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| GTGGGCATTCATTCCCTGGGGTAGACCGGGAGGGGGGTGGGTAGTCTGGGGATCTGGAGTCTGCACTGCGGCTGTAGGGAGAGAGTGGGTACGCCCTGCAGTCCTCATCCCGATGGTTTCCCATCACCTTTCTCAGTCCTGGCCCTCGGGAGGGTCTCCCTGCCCCAGGAGCCCTGCCCCGACGGTCGTTCTACCCACAGGTAGCATCGACCCACCACCAGCAGTCCATTTCCAATGGAAGTCCTGGATG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................TCTGGAGTCTGCACTGCGGC.................................................................................................................................................................................. | 20 | 1 | 10.00 | 10.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................AGTCTGCACTGCGGCTGTAGGGAGAG....................................................................................................................................................................... | 26 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................AGTCTGGGGATCTGGAGTCTGCACT....................................................................................................................................................................................... | 25 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................TGGGGATCTGGAGTCTGCACTGCGGCT................................................................................................................................................................................. | 27 | 1 | 8.00 | 8.00 | - | 5.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................TAGTCTGGGGATCTGGAGTCTGC.......................................................................................................................................................................................... | 23 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................TGGGGATCTGGAGTCTGCACTGCGG................................................................................................................................................................................... | 25 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................TGGGGATCTGGAGTCTGCACTGCGGC.................................................................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - |
| .............................................................TGCACTGCGGCTGTAGG............................................................................................................................................................................ | 17 | 2 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................CACTGCGGCTGTAGGGAGAGAGTGGGTAg.............................................................................................................................................................. | 29 | g | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TCTGCACTGCGGCTGTAGGGAGAGAGT.................................................................................................................................................................... | 27 | 2 | 1.50 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................GCGGCTGTAGGGAGAGAG..................................................................................................................................................................... | 18 | 2 | 1.50 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TAGCATCGACCCACCACCAGCAGTCCATTT................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................TAGCATCGACCCACCACCAGCAGTCCA...................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................GGGATCTGGAGTCTGCACTGCGGCTG................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............CTGGGGTAGACCGGGAGGGGGGTGGGTAGTC............................................................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................ACCGGGAGGGGGGTGGGTAGTCTGGGGAT..................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGTAGCATCGACCCACCACCAGCAG.......................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................GCGGCTGTAGGGAGAGAGTGGca................................................................................................................................................................ | 23 | ca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................CTGCACTGCGGCTGTAGGGAGAG....................................................................................................................................................................... | 23 | 2 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................GAGTCTGCACTGCGGCTGTAGGGAGA........................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................AGACCGGGAGGGGGGT.................................................................................................................................................................................................................... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................GGGTAGACCGGGAGGGGGG..................................................................................................................................................................................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ..................................................................TGCGGCTGTAGGGAGAGAGT.................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ................................................................ACTGCGGCTGTAGGGAGAGAG..................................................................................................................................................................... | 21 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................ATCGACCCACCACCAGCAGTCCATTTC.................. | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| GTGGGCATTCATTCCCTGGGGTAGACCGGGAGGGGGGTGGGTAGTCTGGGGATCTGGAGTCTGCACTGCGGCTGTAGGGAGAGAGTGGGTACGCCCTGCAGTCCTCATCCCGATGGTTTCCCATCACCTTTCTCAGTCCTGGCCCTCGGGAGGGTCTCCCTGCCCCAGGAGCCCTGCCCCGACGGTCGTTCTACCCACAGGTAGCATCGACCCACCACCAGCAGTCCATTTCCAATGGAAGTCCTGGATG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................GCCCTGCAGTCCTCATCCCGATGGT..................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |