| Gene: Ppm1f | ID: uc007yjo.1_intron_0_0_chr16_16896718_f.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(22) TESTES |
| GGCGGGGCTGCCCAGAGCAGCTCGTGGGGAGCACTGCGGCAGGCTGGCAGGTGAGGCCCGCGGGGTGCAAGGGATGAAGAGCGAGGGTGAGGGTGGAAGACTCGGACTAGGGTGGGGGTCATGTGGGGGCCTGAGATGCACGAAAGTGAAATGAGACTGAGGACGAAATGGAGAGGTGAGAAAGCACTAAGGCCAAGACCGGTTTCGGGTGCCTGAGCCCATGGGACTTTGGGGGATAGCTGTGAGCAAA .....................................................................................................(((..((..(((..(((((.......)))))......(((....))).......))).))..))).................................................................................... ........................................................................................89......................................................................................177....................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT4() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATGGAG............................................................................. | 27 | 1 | 31.00 | 31.00 | 1.00 | 6.00 | 7.00 | 4.00 | 5.00 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 1.00 |
| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATGGA.............................................................................. | 26 | 1 | 30.00 | 30.00 | 6.00 | 5.00 | 3.00 | 3.00 | 4.00 | 5.00 | 1.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGCACGAAAGTGAAATGAGACTGAGGAC...................................................................................... | 28 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................AGGGATGAAGAGCGAGGG................................................................................................................................................................... | 18 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | - | 1.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGAGACTGAGGACGAAATGGAGAGG.......................................................................... | 25 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AAGTGAAATGAGACTGAGGACGAAAT................................................................................. | 26 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATGGAGA............................................................................ | 28 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TGGAAGACTCGGACTAGGGTGGGGGTt.................................................................................................................................. | 27 | t | 3.00 | 2.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGAGATGCACGAAAGTGAAATGAGACT............................................................................................ | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - |
| .............................................................................................TGGAAGACTCGGACTAGGGTGGGGGT................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATG................................................................................ | 24 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............GAGCAGCTCGTGGGGAGCACTGCGGC.................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................AGGGATGAAGAGCGAGGGa.................................................................................................................................................................. | 19 | a | 2.00 | 4.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATGGAGt............................................................................ | 28 | t | 2.00 | 31.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................AGGGATGAAGAGCGAGGGTG................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................GTGGGGAGCACTGCGGCAGGCTGGCAta....................................................................................................................................................................................................... | 28 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................AAAGTGAAATGAGACTGAGGACGAAAa................................................................................. | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGCAAGGGATGAAGAGCG....................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGAGATGCACGAAAGTGAAATGAGACTt........................................................................................... | 28 | t | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................GATGAAGAGCGAGGGTGAGGGTGGAA........................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGAGACTGAGGACGAAATGGAGAGa.......................................................................... | 25 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ATGTGGGGGCCTGAGATGCACGAAAGTGAA.................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATGG............................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................ATGAGACTGAGGACGAAATGGAGAGag......................................................................... | 27 | ag | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................AAAGTGAAATGAGACTGAGGACGAAATGt............................................................................... | 29 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGCAAGGGATGAAGAGCGAGGG................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................GCAGCTCGTGGGGAGCACTGCGGCAGt............................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................AGGGTGGGGGTCATGTGGGGGCCTGAG................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGAGATGCACGAAAGTGAAATGAGACTGA.......................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................GCGGGGTGCAAGGGATGAA............................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................GACTCGGACTAGGGTGGGGGTCATGTGt............................................................................................................................ | 28 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................AAAGTGAAATGAGACTGAGGACGAAAT................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................CCTGAGATGCACGAActc....................................................................................................... | 18 | ctc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................TGAGATGCACGAAAGTGAAATGAGACTGt.......................................................................................... | 29 | t | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................CGGCAGGCTGGCAGGTGAGGCC................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................GGGTCATGTGGGGGCCTGAGAT................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATGGAGAG........................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................CTGAGGACGAAATGGAGAGGTGAGAA.................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGAGATGCACGAAAGTGAAATGAGACTGAGt........................................................................................ | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GGTGGAAGACTCGGACTAGGGTGG....................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................CTCGTGGGGAGCACTGCGGCAGGCTGG........................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAGGGATGAAGAGCGAGGGTGAGGGT............................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AAGTGAAATGAGACTGAGGACGAAA.................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................ATGCACGAAAGTGAAATGAGACTGAGGAC...................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................AGCTCGTGGGGAGCACTGCGG................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................................................................................TGGGACTTTGGGGGATAGCTGTGAGC... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................CCATGGGACTTTGGGGGATAGCTGTGA..... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......GCTGCCCAGAGCAGCTCGaaa............................................................................................................................................................................................................................... | 21 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GGGCCTGAGATGCACGAAAGTG...................................................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGAGACTGAGGACGAAATGGAGAGag......................................................................... | 26 | ag | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................CTGAGGACGAAATGGAGAGGTGAGAAAGCAC............................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGAAATGAGACTGAGGACGAAATGGAa............................................................................. | 27 | a | 1.00 | 30.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CACGAAAGTGAAATGAGACTGAGGAC...................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GATGCACGAAAGTGAAATGAGACTGAGG........................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGAGATGCACGAAAGTGAAATGAGACTG........................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCGGGGCTGCCCAGAGCAGCTCGTGGGGAGCACTGCGGCAGGCTGGCAGGTGAGGCCCGCGGGGTGCAAGGGATGAAGAGCGAGGGTGAGGGTGGAAGACTCGGACTAGGGTGGGGGTCATGTGGGGGCCTGAGATGCACGAAAGTGAAATGAGACTGAGGACGAAATGGAGAGGTGAGAAAGCACTAAGGCCAAGACCGGTTTCGGGTGCCTGAGCCCATGGGACTTTGGGGGATAGCTGTGAGCAAA .....................................................................................................(((..((..(((..(((((.......)))))......(((....))).......))).))..))).................................................................................... ........................................................................................89......................................................................................177....................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT4() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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