(3)
OTHER.mut
(1)
OVARY
(5)
PIWI.ip
(2)
PIWI.mut
(23)
TESTES

Sense strand
ATTCCTTTAGTCCCTTGTGACAATGTAACAAACCAATATCCTATGGCTAGTTCCAGACTTGGTCTACCCAGCCACTGTGCCACCATATAATGGCCAGATTCTCAAAGACAGGAAGGACTCGCTCTGGCCCTGGCCCTGCCCTGGTGTCATGTAGCTCTGCTTTGTGAAACCTCAGAAGTTTTTATCTCTGTGTGTTACAGGAGCTCTGGAAGATAGTTGTGGAACCAGCAGCGTGAGTCGCCTCTGTGAC
..................................................................................((((...)))).....(((.(((((.((((........(((.((((((.(((...)))..)).))))...)))))))))))).)))..................................................................................
..................................................................................83......................................................................................171.............................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAGTCGCC........ 29 1 32.00 32.00 4.00 11.00 - - 8.00 7.00 - - - 2.00 - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TGGAAGATAGTTGTGGAACCAGCAGC.................. 26 1 26.00 26.00 1.00 6.00 4.00 2.00 2.00 2.00 - 8.00 - - - - - 1.00 - - - - - - - - - -
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAGTCGC......... 28 1 13.00 13.00 2.00 2.00 - - 6.00 2.00 - - - - - - - - - - - - - - - - - 1.00
.........................................................................................................................................................................................................................TGTGGAACCAGCAGCGTGAGTCGCCTC...... 27 1 13.00 13.00 7.00 3.00 1.00 - - 2.00 - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TACAGGAGCTCTGGAAGATAGTTGT.............................. 25 1 11.00 11.00 - - 4.00 4.00 - - - - 3.00 - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TACAGGAGCTCTGGAAGATAGTTGTG............................. 26 1 10.00 10.00 - 1.00 2.00 5.00 - - - - - - 1.00 - 1.00 - - - - - - - - - - -
.................................................................................................................................................................................................................AAGATAGTTGTGGAACCAGCAGCGTGAGTCG.......... 31 1 9.00 9.00 - - - - - - 9.00 - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAGTC........... 26 1 9.00 9.00 1.00 1.00 2.00 1.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
........................................................................................................................................................................................................................TTGTGGAACCAGCAGCGTGAG............. 21 1 9.00 9.00 - - - - - - 9.00 - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................TTACAGGAGCTCTGGAAGATAGTTGT.............................. 26 1 8.00 8.00 3.00 - - 2.00 - 1.00 - - - - - 1.00 - 1.00 - - - - - - - - - -
.......................................................................................TAATGGCCAGATTCTCAAAGACAGGAA........................................................................................................................................ 27 1 8.00 8.00 3.00 2.00 1.00 - - 1.00 - - - 1.00 - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TGGAAGATAGTTGTGGAACCAGCAGCGT................ 28 1 7.00 7.00 1.00 2.00 1.00 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAGTCGCCT....... 30 1 6.00 6.00 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TGTTACAGGAGCTCTGGAAGATAGT................................. 25 1 4.00 4.00 - - - 2.00 - - - - 1.00 - - - - - 1.00 - - - - - - - - -
.......................................................................................TAATGGCCAGATTCTCAAAGACAGGA......................................................................................................................................... 26 1 4.00 4.00 1.00 - - - - - - - - - 1.00 1.00 - - 1.00 - - - - - - - - -
.....................................................................................................................................................................................................CAGGAGCTCTGGAAGATAGTTGTGGA........................... 26 1 4.00 4.00 - 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - -
.........................................................................................................................................................................................................................TGTGGAACCAGCAGCGTGAGTCGCCT....... 26 1 4.00 4.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................TTGTGGAACCAGCAGCGTGAGTCGCCTC...... 28 1 4.00 4.00 1.00 1.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - -
.....................................................................................TATAATGGCCAGATTCTCAAAGACAGGA......................................................................................................................................... 28 1 3.00 3.00 2.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
.............................................................................................................................................TGGTGTCATGTAGCTCTGCTTTGTGA................................................................................... 26 1 3.00 3.00 - - 1.00 - - - - - - - 2.00 - - - - - - - - - - - - -
.......................................................................................TAATGGCCAGATTCTCAAAGACAGGAAG....................................................................................................................................... 28 1 3.00 3.00 1.00 - 2.00 - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TGGAAGATAGTTGTGGAACCAGCAG................... 25 1 3.00 3.00 - - - 2.00 - 1.00 - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAGTCG.......... 27 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................ACAGGAGCTCTGGAAGATAGTTGTGGA........................... 27 1 2.00 2.00 - - 1.00 - - - - - 1.00 - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................GTTGTGGAACCAGCAGCGTGAGTCGCCTC...... 29 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TGGAAGATAGTTGTGGAACCAGCAGCG................. 27 1 2.00 2.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
....................................TATCCTATGGCTAGTTCCAGACTTGGTCT......................................................................................................................................................................................... 29 1 2.00 2.00 - - - - - - - - - - - - - - - 2.00 - - - - - - - -
................................................................................................................................................................................................TGTTACAGGAGCTCTGGAAGATAGTTGT.............................. 28 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................CAGGAGCTCTGGAAGATAGTTGTGGAA.......................... 27 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................TAGCTCTGCTTTGTGAAACCTCAGAAG........................................................................ 27 1 2.00 2.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................AGTTGTGGAACCAGCAGCGTGAGTCGCCT....... 29 1 2.00 2.00 - - - - - 1.00 - - - - - - - - - - - 1.00 - - - - - -
................................................................................................................................................................................................TGTTACAGGAGCTCTGGAAGATAGTTG............................... 27 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................TATAATGGCCAGATTCTCAAAGACAGGAA........................................................................................................................................ 29 1 2.00 2.00 - - 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................................TGTGTTACAGGAGCTCTGGAAGATA................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................AGGAGCTCTGGAAGATAGTTGTGGAAC......................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................TATAATGGCCAGATTCTCAAAGACAG........................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
......................................................................................................................................................................................................AGGAGCTCTGGAAGATAGTTGTGGAA.......................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................................................................................................................................................TACAGGAGCTCTGGAAGATAGTTGTGGAAC......................... 30 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
........................................................................................................AAGACAGGAAGGACTCGCTCTGGCCCT....................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................CAGGAGCTCTGGAAGATAGTTGTGG............................ 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................TTACAGGAGCTCTGGAAGATAGTTGTG............................. 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................GGAGCTCTGGAAGATAGTTGTGGAACC........................ 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................................TGGTGTCATGTAGCTCTGCTTTGTGAAt................................................................................. 28 t 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..........................................................................................TGGCCAGATTCTCAAAGACAGGAAGGACTCGC................................................................................................................................ 32 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................TGCCCTGGTGTCATGTAGCTCTGCTcc....................................................................................... 27 cc 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...........................................................................................................................................................................................................................TGGAACCAGCAGCGTGAGTCGCCTCT..... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAG............. 24 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................CAGGAAGGACTCGCTCTGGCCCTGGCCta................................................................................................................. 29 ta 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................TGTGTTACAGGAGCTCTGGAAGATAGT................................. 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGTAGCTCTGCTTTGTGAAACCTCAGAAG........................................................................ 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.....................................................................................TATAATGGCCAGATTCTCAAAGACAGG.......................................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................TTACAGGAGCTCTGGAAGATAGT................................. 23 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..............................................................................................................................................................................................................TGGAAGATAGTTGTGGAACCAGC..................... 23 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................AGTTGTGGAACCAGCAGCGTGAGTCGCC........ 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................TGGAAGATAGTTGTGGAACCAGCAGCGTGA.............. 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...............................................................................................................................................................................................................GGAAGATAGTTGTGGAACCAGCA.................... 23 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................................................................................................................................................TACAGGAGCTCTGGAAGATAGTTGTGG............................ 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................AGGAAGGACTCGCTCTGGCCCTGGC.................................................................................................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................TGTGGAACCAGCAGCGTGAGTCGCC........ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................GGAGCTCTGGAAGATAGTTGTGGAAC......................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................GTGTTACAGGAGCTCTGGAAGATAGT................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.........................................................................................................................................................................................................................TGTGGAACCAGCAGCGTGAGTCGCCTt...... 27 t 1.00 4.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................TCAAAGACAGGAAGGACTCGCTCTG............................................................................................................................ 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................TGGTGTCATGTAGCTCTGCTTTGTGAA.................................................................................. 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..........................................................................................................................................CCCTGGTGTCATGTAGCTCTGCTT........................................................................................ 24 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
......................................................................................................................................................................................................................AGTTGTGGAACCAGCAGCGTGAGTCGCCTC...... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - -
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAGTCGCa........ 29 a 1.00 13.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................................................................................................TGGCCCTGCCCTGGTGTCATGTAGCTC............................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - -
........................................................................................................................................................................................................................TTGTGGAACCAGCAGCGTGAGTCGCCTCT..... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TAGTTGTGGAACCAGCAGCGTGAGacg.......... 27 acg 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....................................................................................TATAATGGCCAGATTCTCAAAGACAGGAAG....................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
................................................................................................................................................................................................TGTTACAGGAGCTCTGGAAGATAGTT................................ 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................TGTAACAAACCAATATCCTATGGCTAGT....................................................................................................................................................................................................... 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................TTGTGGAACCAGCAGCGTGAGTCGCCT....... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................ACAGGAGCTCTGGAAGATAGTTGTGG............................ 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...................................................................................................................................................................................................................GATAGTTGTGGAACCAGCAGCGTGAGTC........... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TACAGGAGCTCTGGAAGATAGTTGTGGA........................... 28 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
....................................................................................................................................................................................................ACAGGAGCTCTGGAAGATAGTTGTGGAA.......................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -

Antisense strand
ATTCCTTTAGTCCCTTGTGACAATGTAACAAACCAATATCCTATGGCTAGTTCCAGACTTGGTCTACCCAGCCACTGTGCCACCATATAATGGCCAGATTCTCAAAGACAGGAAGGACTCGCTCTGGCCCTGGCCCTGCCCTGGTGTCATGTAGCTCTGCTTTGTGAAACCTCAGAAGTTTTTATCTCTGTGTGTTACAGGAGCTCTGGAAGATAGTTGTGGAACCAGCAGCGTGAGTCGCCTCTGTGAC
..................................................................................((((...)))).....(((.(((((.((((........(((.((((((.(((...)))..)).))))...)))))))))))).)))..................................................................................
..................................................................................83......................................................................................171.............................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)