| Gene: 3930401K13Rik | ID: uc007ybl.1_intron_1_0_chr16_5018618_r | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(2) PIWI.mut |
(14) TESTES |
| CCTTAATCAGGGACAATTGGCCAGCATCTTTCTGGACCAGAAGTGCCAAAGTAAGTCACCTTTGACTATTCTTGCAATTTTATTTTCATTAGAGCTGAGCAGCTGGGTCAGACCATCCAGGAAAGAGTCCTTTCATGATTCATTGTTTAAAGAGCCCCCTTTCCAGTCATTCCTTGCCCCGTTCCAAAGAGGCCCAGAGACACGGTGAAAATGGTATTTGAGGCCCCAGAGTAGGCCCTGAGTCTTTTGGACATGGGGGAGGACAGGGCCGTGCCCTTAGGAAATGGTGGAGGTGAGCCTGATACTCGGCGGGCAATTTTCATGTAGATCTTTTAAACTTCTAATGAATGGCTTTCCCTTCTCAGATATCCTACAAGGAAACTTTAAACCTGACTTCTACCTGAAATACATTCAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................TCATTCCTTGCCCCGTTCCAAAGAGGCCCAGAGACACGGTGAAAATGGTATT..................................................................................................................................................................................................... | 52 | 1 | 83.00 | 83.00 | 83.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CATCTTTCTGGACCAGAAGTGCCAAA............................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - |
| ..TTAATCAGGGACAATTGGCCAGCATa................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | a | 2.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TAATCAGGGACAATTGGCCAGCATCT.................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TAATCAGGGACAATTGGCCAGCATC................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TTAATCAGGGACAATTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TTAATCAGGGACAATTGGCCAGCATC................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................TGGACCAGAAGTGCCAAA............................................................................................................................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..TTAATCAGGGACAATTGGCCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....ATCAGGGACAATTGGCCAGta..................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | ta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................GCATCTTTCTGGACCAGAAGTG.................................................................................................................................................................................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........GGGACAATTGGCCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TTAATCAGGGACAATTGGCCAGCATCT.................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................TAAACCTGACTTCTACCTGAAATACATTCAa | 31 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................GCATCTTTCTGGACCAGAAGT................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................TCTTTCTGGACCAGAAGTGCC................................................................................................................................................................................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......CAGGGACAATTGGCCAGtt..................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | tt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TCTTTCTGGACCAGAAGTGCCAAAata.......................................................................................................................................................................................................................................................................................................................................................................... | 27 | ata | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TAATCAGGGACAATTGGCCAGCATCTTT................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......TCAGGGACAATTGGCCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TTAATCAGGGACAATTGGCCAGCAT.................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| CCTTAATCAGGGACAATTGGCCAGCATCTTTCTGGACCAGAAGTGCCAAAGTAAGTCACCTTTGACTATTCTTGCAATTTTATTTTCATTAGAGCTGAGCAGCTGGGTCAGACCATCCAGGAAAGAGTCCTTTCATGATTCATTGTTTAAAGAGCCCCCTTTCCAGTCATTCCTTGCCCCGTTCCAAAGAGGCCCAGAGACACGGTGAAAATGGTATTTGAGGCCCCAGAGTAGGCCCTGAGTCTTTTGGACATGGGGGAGGACAGGGCCGTGCCCTTAGGAAATGGTGGAGGTGAGCCTGATACTCGGCGGGCAATTTTCATGTAGATCTTTTAAACTTCTAATGAATGGCTTTCCCTTCTCAGATATCCTACAAGGAAACTTTAAACCTGACTTCTACCTGAAATACATTCAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................................................................................................................................................................GCTTTCCCTTCTCAGATATCCTACAA....................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................ACCAGAAGTGCCAAAggct............................................................................................................................................................................................................................................................................................................................................................................. | 19 | ggct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................................................................................................................................................................................CTTTTAAACTTCTAgata........................................................................ | 18 | gata | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................CCTGACTTCTACCTGAAATACATTCA. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |