(1)
OTHER.ip
(6)
OTHER.mut
(7)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(37)
TESTES

Sense strand
GGCTTGCATATGGCCTGTGAAAAACGAAGCCCACATCTCACCAACAGGAGGTATGCTGCCAAGCCTGTTTTCAAATTGGCAGCAGAAAGCAGCACAGAACAAGGCCCTTTGTCGAGAACTGATCTTTCCAGACCTGCTCCTGGGCAGGATGTGCAAAGTATGACTGCCTTTTCCTCTAAAGTGCCCTGGTCTCTCTGCAGTCTGACTGTGAGGAAGAAGAGCTCTTCATCTTTCAGCGGAACGAGCCCGT


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
...................................................................................................................................................................................................TGCAGTCTGACTGTGAGGAAGAAGAGC............................ 27 1 13.00 13.00 - 5.00 1.00 - - 5.00 - - 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................TCTAAAGTGCCCTGGTCTCTCTGCAG.................................................. 26 1 9.00 9.00 7.00 - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTCTTCATC.................... 28 1 8.00 8.00 - - - - - - 1.00 - - 2.00 - - - - - - - - 1.00 1.00 1.00 - - 1.00 - - - - 1.00 - - - - - - - -
..............................................................................................................................................................................................................TGTGAGGAAGAAGAGCTCTTCATCTTTCAGC............. 31 1 7.00 7.00 6.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...................................................................................................................................................................................................TGCAGTCTGACTGTGAGGAAGAAGAGCT........................... 28 1 6.00 6.00 - 2.00 - 3.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........TATGGCCTGTGAAAAACGAAGCCCACATC..................................................................................................................................................................................................................... 29 1 5.00 5.00 - - - - 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGCAGTCTGACTGTGAGGAAGAAGAG............................. 26 1 4.00 4.00 - 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.................................................................................................................................................................................................TCTGCAGTCTGACTGTGAGGAAGAAGAGC............................ 29 1 3.00 3.00 - - - 1.00 - - - - - - 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.................TGAAAAACGAAGCCCACATCTCACCAACA............................................................................................................................................................................................................ 29 1 2.00 2.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTCTTC....................... 25 1 2.00 2.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - 1.00 -
...................................................................................................................................................................................................TGCAGTCTGACTGTGAGGAAGAAGA.............................. 25 1 2.00 2.00 - 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTCTTCA...................... 26 1 2.00 2.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.................TGAAAAACGAAGCCCACATCTCACCAAC............................................................................................................................................................................................................. 28 1 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - 1.00
....TGCATATGGCCTGTGAAAAACGAAGC............................................................................................................................................................................................................................ 26 1 2.00 2.00 - - 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTCTTCAT..................... 27 1 2.00 2.00 - 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGTGCAAAGTATGACTGCCTTTTCCTC.......................................................................... 27 1 2.00 2.00 - - - 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................TCTTTCAGCGGAACGAGCCCGTcctt 26 cctt 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.................TGAAAAACGAAGCCCACATCTCACC................................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................TCGAGAACTGATCTTTCCAGACCTGC................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.............................................................................................................TGTCGAGAACTGATCTTTCCAGACCTGC................................................................................................................. 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................TAAAGTGCCCTGGTCTCTCTGCAGTCT............................................... 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................TCTTTCAGCGGAACGAGCCCGTcccg 26 cccg 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........TGGCCTGTGAAAAACGAAGCCCACATCT.................................................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................TTTCCTCTAAAGTGCCCTGGTCTCTC....................................................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................TGTGCAAAGTATGACTGCCTTTTCC............................................................................ 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTCTTCATCTTT................. 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...............................................................CCTGTTTTCAAATTGGCAGCAGAAAGCAGCA............................................................................................................................................................ 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................GAGGAAGAAGAGCTCTTCATCTTTC................ 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................CTGACTGTGAGGAAGAAGAGCTCTTCATC.................... 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................TTTGTCGAGAACTGATCTTTCCAGACC.................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................GGAAGAAGAGCTCTTCATCTTTCAGCGGA.......... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................................................................TCTGACTGTGAGGAAGAAGAGCTC.......................... 24 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................AAGAAGAGCTCTTCATCTTTCAGCGGca......... 28 ca 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...........................................................................................................TTTGTCGAGAACTGATCTTTCCAcact.................................................................................................................... 27 cact 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTC.......................... 22 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................TTTCAAATTGGCAGCAGAAAGCAGCAC........................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TGAGGAAGAAGAGCTCTTCATCTTTCAGC............. 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................TTCATCTTTCAGCGGAACGAGCCCGT 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................AGAAGAGCTCTTCATCTTTCAGCGGAACGAt..... 31 t 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TGAGGAAGAAGAGCTCTTCATCTTTC................ 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTCTTCATCT................... 29 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................CTAAAGTGCCCTGGTCTCTCTGCAGT................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................TGCAGTCTGACTGTGAGGAAGAAGAGCTC.......................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........TGGCCTGTGAAAAACGAAGC............................................................................................................................................................................................................................ 20 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................AAGAAGAGCTCTTCATCTTTCAGCGGAACGt...... 31 t 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
................................................................................................................................................................................TAAAGTGCCCTGGTCTCTCTGCAGTC................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................TGACTGTGAGGAAGAAGAGCTCTTCATCTT.................. 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..........................................................................................................................................................................................................................GAGCTCTTCATCTTTCAGCGGAACGA...... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
GGCTTGCATATGGCCTGTGAAAAACGAAGCCCACATCTCACCAACAGGAGGTATGCTGCCAAGCCTGTTTTCAAATTGGCAGCAGAAAGCAGCACAGAACAAGGCCCTTTGTCGAGAACTGATCTTTCCAGACCTGCTCCTGGGCAGGATGTGCAAAGTATGACTGCCTTTTCCTCTAAAGTGCCCTGGTCTCTCTGCAGTCTGACTGTGAGGAAGAAGAGCTCTTCATCTTTCAGCGGAACGAGCCCGT


Size Perfect hit Total Norm Perfect Norm mjTestesWT1()
Testes Data. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT2()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
.........................................................................................................TGTCGAGAACTcaag.................................................................................................................................. 15 caag 2.00 0.00 - - 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................GCCAAGCCTGTTTTCAgg................................................................................................................................................................................. 18 gg 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -