(1)
OTHER.ip
(7)
OTHER.mut
(1)
OVARY
(3)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(26)
TESTES

Sense strand
TGGGGCTCAGCCCCCTGTGATTCCACCAGCCCAGTCTGTAAGACCTCCAAGTAAGAACTGCATTTCTCTCTTCCAGTCCTTAGCTTGTTTGCTTAGTGCTCTTTTAGTCTTTGGAGTATATTTTTAAGACTACAGAGTTCTGTTCTCCAAAATCTGCACTTTGAAAGCTCTTTGTATGATCTTGCCTTATGGGAAGAATCTTTTATTTTTGTTTCTTTTTTGGTGTCTCCCAAGTTTTTCAAGACAGGCTTATTTCTCTGTGCACCCCTGGCTAATCTGGAGCTCACTCTGTAGACCAGGCTAGCTTCAAATTCAGAGATCCTCTGCCGCTGCCGCCGCCCACCTTCCCCTCACCACTGCCCAGCAGAGGGGAGATATCTTAAAAGGGTGTGCTGGCAAGTGTCTTTTAGATTCAATGTGTTTGTGTGTGTGTATGTGTATTTATTTTTAATTACATTTTCCTCCTTATAGATGGGCCCCTGCCTTTGCCAGTGAATCGCATGCAGGTTTCTCAAGGTATT
.................................................................................................................................(((((((((...((((((((.....(((((...(((((((........((((((.((....)).)))).))......(((((.......(((((......))))).....)))))..)))))...))...)))))....))).......)))))..)))))))))...................................................................................................................................................................................................................................
.......................................................................................................................120............................................................................................................................................................................................311................................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
............................................................................................................................TAAGACTACAGAGTTCTGTTCTCCAAAATCTGCACTTTGAAAGCTCTTTGTA......................................................................................................................................................................................................................................................................................................................................................... 52 1 88.00 88.00 88.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtcaa...................................................................................................................................................................................................................... 24 tcaa 9.00 0.00 - 6.00 - - - - - - 1.00 - - - - - - 1.00 1.00 - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCgaag................................................................................................................................................................................................................. 29 gaag 6.00 0.00 - - - - - 6.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TGGAGCTCACTCTGTAGACCAGGCTtt......................................................................................................................................................................................................................... 27 tt 4.00 0.00 - - 2.00 - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTtt.................................................................................................................................................................................................................... 26 tt 3.00 0.00 - - - - - - 1.00 - - - - 2.00 - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TGGAGCTCACTCTGTAGACCAGGttaa......................................................................................................................................................................................................................... 27 ttaa 2.00 0.00 - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtaga...................................................................................................................................................................................................................... 24 taga 2.00 0.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................CTCACTCTGTAGACCAGGCTAtcaa...................................................................................................................................................................................................................... 25 tcaa 2.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTta.................................................................................................................................................................................................................... 26 ta 2.00 0.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTttt................................................................................................................................................................................................................... 27 ttt 2.00 0.00 - 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCgt................................................................................................................................................................................................................... 27 gt 2.00 0.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtaa....................................................................................................................................................................................................................... 23 taa 2.00 0.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTtta................................................................................................................................................................................................................... 27 tta 2.00 0.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTtat................................................................................................................................................................................................................... 27 tat 2.00 0.00 - - - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTaa.................................................................................................................................................................................................................... 26 aa 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCgaaa................................................................................................................................................................................................................. 29 gaaa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................GGAGCTCACTCTGTAGACCAcctg........................................................................................................................................................................................................................... 24 cctg 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.....................TCCACCAGCCCAGTCTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 19 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................CACTCTGTAGACCAGGCTAGCTTtttt.................................................................................................................................................................................................................. 27 tttt 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................TGTAGACCAGGCTAGCTTCAAATTCAtt............................................................................................................................................................................................................ 28 tt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtttc...................................................................................................................................................................................................................... 24 tttc 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCAAAaa................................................................................................................................................................................................................ 30 aa 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TGGAGCTCACTCTGTAGACCAGGCTtta........................................................................................................................................................................................................................ 28 tta 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............TGTGATTCCACCAGCCCAGTCTGTAAGAa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 29 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtccg...................................................................................................................................................................................................................... 24 tccg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCgta.................................................................................................................................................................................................................. 28 gta 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................ACCAGCCCAGTCTGTAAGACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTtgta.................................................................................................................................................................................................................. 28 tgta 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TGGAGCTCACTCTGTAGACtagt............................................................................................................................................................................................................................. 23 tagt 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCAAt.................................................................................................................................................................................................................. 28 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................AGTCTGTAAGACCTCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtcac...................................................................................................................................................................................................................... 24 tcac 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TGGAGCTCACTCTGTAGACCAGGtagg......................................................................................................................................................................................................................... 27 tagg 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................CTCACTCTGTAGACCAGGCTAGCgaa..................................................................................................................................................................................................................... 26 gaa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTaat................................................................................................................................................................................................................... 27 aat 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtaaa...................................................................................................................................................................................................................... 24 taaa 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCtt................................................................................................................................................................................................................... 27 tt 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCgg...................................................................................................................................................................................................................... 24 gg 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAtatt...................................................................................................................................................................................................................... 24 tatt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCgaa..................................................................................................................................................................................................................... 25 gaa 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................................................................................TGGGAAGAATCTTTTAaat......................................................................................................................................................................................................................................................................................................................... 19 aat 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTgtgc................................................................................................................................................................................................................... 27 gtgc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
................GTGATTCCACCAGCCCAGTCTGTAAGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 29 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TGGAGCTCACTCTGTAGACCAGGaaa.......................................................................................................................................................................................................................... 26 aaa 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTtct................................................................................................................................................................................................................... 27 tct 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCActa................................................................................................................................................................................................................. 29 cta 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAttaa...................................................................................................................................................................................................................... 24 ttaa 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................CACTCTGTAGACCAGGCTAGCTTCAAAaa................................................................................................................................................................................................................ 29 aa 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.................................GTCTGTAAGACCTCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGTGAATCGCATGCAGGTTTCT......... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTtgt................................................................................................................................................................................................................... 27 tgt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................CACTCTGTAGACCAGGCTAGCTTCAAATT................................................................................................................................................................................................................ 29 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCAAATTC............................................................................................................................................................................................................... 31 2 0.50 0.50 - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TCACTCTGTAGACCAGGCTAGCTTCAAATT................................................................................................................................................................................................................ 30 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
TGGGGCTCAGCCCCCTGTGATTCCACCAGCCCAGTCTGTAAGACCTCCAAGTAAGAACTGCATTTCTCTCTTCCAGTCCTTAGCTTGTTTGCTTAGTGCTCTTTTAGTCTTTGGAGTATATTTTTAAGACTACAGAGTTCTGTTCTCCAAAATCTGCACTTTGAAAGCTCTTTGTATGATCTTGCCTTATGGGAAGAATCTTTTATTTTTGTTTCTTTTTTGGTGTCTCCCAAGTTTTTCAAGACAGGCTTATTTCTCTGTGCACCCCTGGCTAATCTGGAGCTCACTCTGTAGACCAGGCTAGCTTCAAATTCAGAGATCCTCTGCCGCTGCCGCCGCCCACCTTCCCCTCACCACTGCCCAGCAGAGGGGAGATATCTTAAAAGGGTGTGCTGGCAAGTGTCTTTTAGATTCAATGTGTTTGTGTGTGTGTATGTGTATTTATTTTTAATTACATTTTCCTCCTTATAGATGGGCCCCTGCCTTTGCCAGTGAATCGCATGCAGGTTTCTCAAGGTATT
.................................................................................................................................(((((((((...((((((((.....(((((...(((((((........((((((.((....)).)))).))......(((((.......(((((......))))).....)))))..)))))...))...)))))....))).......)))))..)))))))))...................................................................................................................................................................................................................................
.......................................................................................................................120............................................................................................................................................................................................311................................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
......................................................................TTCCAGTCCTTAGCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................... 16 8 0.12 0.12 - - - - - - - - - - - - - - - - - - - - - - - - - - 0.12