(1)
OTHER.ip
(2)
OTHER.mut
(3)
PIWI.ip
(2)
PIWI.mut
(1)
TDRD1.ip
(28)
TESTES

Sense strand
TCTATCAAGGTATATGGTACAAGATAGCTATGAGAACTCGGGGACTCTAGGTAAGAGCTTCTCGTTCTGGGATGATATTTATGACCAGACTATCCTGCTTCTTGGACATACACACCTACTGGACATGAGCTCTGAGTTTTGTCAATAACCCCACTCCTTACTCTAACATTTCTTATCCTAATATTCAGATAAACATCTGCCAAATGGCACAGTTGATAGACTTAATGGTATCCTTAGACTGTGTTTCCAT
.......................................................................................................(((........((....))....(((....((((...((.....))...))))....)))............))).......(((((....)))))...................................................
....................................................................................................101................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
mjTestesWT2()
Testes Data. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
......................................................................................AGACTATCCTGCTTCTTGGACATACACACCTACTGGACATGAGCTCTGAGTT................................................................................................................ 52 1 92.00 92.00 92.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTAAGAGCTTCTCGTTCTGGGATGATATTTATGACCAGACTATCCTGCTTCT.................................................................................................................................................... 52 1 44.00 44.00 - 44.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........ATATGGTACAAGATAGCTATGAGAACTC................................................................................................................................................................................................................... 28 1 13.00 13.00 - - 5.00 3.00 - 1.00 2.00 - - - 1.00 - - - - - - - 1.00 - - - - - - - - -
...........ATATGGTACAAGATAGCTATGAGAACT.................................................................................................................................................................................................................... 27 1 8.00 8.00 - - 3.00 - - 1.00 2.00 - 1.00 - - - - - - - - - - - - - - 1.00 - - - -
.....................AGATAGCTATGAGAACTCGGGGACTC........................................................................................................................................................................................................... 26 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - -
..................ACAAGATAGCTATGAGAACTCGGGGACTC........................................................................................................................................................................................................... 29 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........ATATGGTACAAGATAGCTATGAGAACTCG.................................................................................................................................................................................................................. 29 1 2.00 2.00 - - - - - 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - -
....................AAGATAGCTATGAGAACTCGGG................................................................................................................................................................................................................ 22 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - -
...........ATATGGTACAAGATAGCTATGAGAACTCa.................................................................................................................................................................................................................. 29 a 2.00 13.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...............GGTACAAGATAGCTATGAGAACTCGGGG............................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
....................AAGATAGCTATGAGAACTCGGGGACTCT.......................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
....................AAGATAGCTATGAGAACTCGGGGAC............................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................ACAAGATAGCTATGAGAACTCGGGGACT............................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..................ACAAGATAGCTATGAGAACTCGGG................................................................................................................................................................................................................ 24 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.................TACAAGATAGCTATGAGAACTCGGGt............................................................................................................................................................................................................... 26 t 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..............................TGAGAACTCGGGGACTCTAGagt..................................................................................................................................................................................................... 23 agt 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
............................TATGAGAACTCGGGGACTCTAGagt..................................................................................................................................................................................................... 25 agt 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................................................................CACACCTACTGGACATGAGCT....................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.................TACAAGATAGCTATGAGAACTCGGGG............................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..................ACAAGATAGCTATGAGAACTCGGGGt.............................................................................................................................................................................................................. 26 t 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..................ACAAGATAGCTATGAGAACTCGGGGA.............................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...........................CTATGAGAACTCGGGGACT............................................................................................................................................................................................................ 19 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
..........TATATGGTACAAGATAGCTATGAGAACTC................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.............................ATGAGAACTCGGGGACT............................................................................................................................................................................................................ 17 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................TACTGGACATGAGCTCTGAGTTTTGTC........................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................TGGTATCCTTAGACTGTG....... 18 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..TATCAAGGTATATGGTACAAGATAGC.............................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
........................TAGCTATGAGAACTCGGGGACTCTAGa....................................................................................................................................................................................................... 27 a 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................ACAAGATAGCTATGAGAACTCGGGGACaa........................................................................................................................................................................................................... 29 aa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........ATATGGTACAAGATAGCTATGAGAACTCGG................................................................................................................................................................................................................. 30 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............TGGTACAAGATAGCTATGAGAACTCGGGGt.............................................................................................................................................................................................................. 30 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........GTATATGGTACAAGATAGCTATGAGAACT.................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
....................AAGATAGCTATGAGAACT.................................................................................................................................................................................................................... 18 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
..........TATATGGTACAAGATAGCTATGAGAACTCGG................................................................................................................................................................................................................. 31 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
........................................GGGACTCTAGGTAAGA.................................................................................................................................................................................................. 16 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.50

Antisense strand
TCTATCAAGGTATATGGTACAAGATAGCTATGAGAACTCGGGGACTCTAGGTAAGAGCTTCTCGTTCTGGGATGATATTTATGACCAGACTATCCTGCTTCTTGGACATACACACCTACTGGACATGAGCTCTGAGTTTTGTCAATAACCCCACTCCTTACTCTAACATTTCTTATCCTAATATTCAGATAAACATCTGCCAAATGGCACAGTTGATAGACTTAATGGTATCCTTAGACTGTGTTTCCAT
.......................................................................................................(((........((....))....(((....((((...((.....))...))))....)))............))).......(((((....)))))...................................................
....................................................................................................101................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
mjTestesWT2()
Testes Data. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)