| Gene: Nckap1l | ID: uc007xyf.1_intron_7_0_chr15_103294846_f | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(3) PIWI.mut |
(20) TESTES |
| GATGGCCTGTGAGTATCTGTCCGTGGAAGTGATGGAGCGATGGATCATAAGTAAGTTGTAGGAGCACCTGGGGAAGGGCATGGCAGCATTCCCAGGAGTGCACTGCCTAAAAGCCTTCTTTTTGTTCTTACCAACCTACAGTTGGGTTTCTTCTTTGCCATGGGTGCCTCAACTCCAACAGCCAGTGCCAG ..................................................(((.((((((((((((...((((((((....((((((((((....))))))..))))......)))))))).))))))))).))).))).................................................... ..................................................51........................................................................................141................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ..................................................GTAAGTTGTAGGAGCACCTGGGGAAGG.................................................................................................................. | 27 | 1 | 10.00 | 10.00 | 6.00 | 1.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTTGTAGGAGCACCTGGGG...................................................................................................................... | 23 | 1 | 8.00 | 8.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................GTAAGTTGTAGGAGCACCTGGGGAAG................................................................................................................... | 26 | 1 | 8.00 | 8.00 | - | - | 1.00 | - | - | - | - | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - |
| ..................................................GTAAGTTGTAGGAGCACCTGGGGAAGGGC................................................................................................................ | 29 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTAAGTTGTAGGAGCACCTGGGGAAGGGCA............................................................................................................... | 30 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........GAGTATCTGTCCGTGGA.................................................................................................................................................................... | 17 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGTTGTAGGAGCACCTGGGGAAGGGC................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................CAACTCCAACAGCCAGatga.. | 20 | atga | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 |
| ......................GTGGAAGTGATGGAGCGATGGA................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................AAGTTGTAGGAGCACCTGGGGAAGG.................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGTTGTAGGAGCACCTGGGGAAGGGCATt............................................................................................................. | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................TAAGTTGTAGGAGCACCTGGGGAAGG.................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTTGTAGGAGCACCTGGGGA..................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTTGTAGGAGCACCTGGGGAA.................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GATGGCCTGTGAGTATCTGTCCGTGGAAGTGATGGAGCGATGGATCATAAGTAAGTTGTAGGAGCACCTGGGGAAGGGCATGGCAGCATTCCCAGGAGTGCACTGCCTAAAAGCCTTCTTTTTGTTCTTACCAACCTACAGTTGGGTTTCTTCTTTGCCATGGGTGCCTCAACTCCAACAGCCAGTGCCAG ..................................................(((.((((((((((((...((((((((....((((((((((....))))))..))))......)))))))).))))))))).))).))).................................................... ..................................................51........................................................................................141................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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