| Gene: AK039268 | ID: uc007xst.1_intron_1_0_chr15_101054065_r.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(12) TESTES |
| CCATTAATCTCTCTCCCGCCCAGGGCTCCAGGACCCTCAACTTGTTCGAGGCAAGTGGTGAGGTTCCTTCTCTATCCCTGCTCCAACTTGAGAAGGTGCTTGGGCGGCAGGGTCCTGAGAGTTTTTAGACTTCTGGACACCCGCAGGCGGAGCAGGAGGCGGCAGAAAGCCAGATGGAGCAAGCTGTAGAAAGGGGGTGCTGGGGCGGAGTTAAGGCAAGAGAGTGGGAGGAGATGGGGCATCCGCGTGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................TAGACTTCTGGACACCCGCAGGCGGAGC................................................................................................. | 28 | 1 | 10.00 | 10.00 | 4.00 | - | 1.00 | 5.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGAGCAAGCTGTAGAAAGGGGGTGC.................................................. | 26 | 1 | 6.00 | 6.00 | - | 3.00 | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - |
| ..............................................................................................................................................................................TGGAGCAAGCTGTAGAAAGGGGG..................................................... | 23 | 1 | 5.00 | 5.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................TCTGGACACCCGCAGGCG..................................................................................................... | 18 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGAGCAAGCTGTAGAAAGGGGGTG................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................GAAAGCCAGATGGAGCAAGCTGTAGA............................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................GAAAGCCAGATGGAGCAAGCTGTAG............................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................TTAGACTTCTGGACACCCGCAGGCGGt................................................................................................... | 27 | t | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGAGCAAGCTGTAGAAAGGGGGTGCT................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................TAGACTTCTGGACACCCGCAGGCGGAGt................................................................................................. | 28 | t | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TAGACTTCTGGACACCCGCAGGCGGAG.................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TAAGGCAAGAGAGTGGGAGGAGATG.............. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TTAGACTTCTGGACACCCGCAGGCGG.................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................TGGAGCAAGCTGTAGAAAGGGGGTGt.................................................. | 26 | t | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TAGAAAGGGGGTGCTGGGGCGGAGa....................................... | 25 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................TAGACTTCTGGACACCCGCAGGC...................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGAGCAAGCTGTAGAAAGGG....................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................AGCTGTAGAAAGGGGGTGCTGGGG............................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGGAGCAAGCTGTAGAAAGGGGGggc.................................................. | 26 | ggc | 1.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................GACTTCTGGACACCCGCAGGCGGAGC................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................TAGACTTCTGGACACC............................................................................................................. | 16 | 10 | 0.10 | 0.10 | - | - | 0.10 | - | - | - | - | - | - | - | - | - |
| CCATTAATCTCTCTCCCGCCCAGGGCTCCAGGACCCTCAACTTGTTCGAGGCAAGTGGTGAGGTTCCTTCTCTATCCCTGCTCCAACTTGAGAAGGTGCTTGGGCGGCAGGGTCCTGAGAGTTTTTAGACTTCTGGACACCCGCAGGCGGAGCAGGAGGCGGCAGAAAGCCAGATGGAGCAAGCTGTAGAAAGGGGGTGCTGGGGCGGAGTTAAGGCAAGAGAGTGGGAGGAGATGGGGCATCCGCGTGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................GTTCCTTCTCTATCCCTG.......................................................................................................................................................................... | 18 | 2 | 1.50 | 1.50 | - | - | - | - | 1.50 | - | - | - | - | - | - | - |
| .................................................................................................................................CTTCTGGACACCCGCAGG....................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................CGGAGCAGGAGGCGGCAGA.................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |