| Gene: Ccnt1 | ID: uc007xmv.1_intron_7_0_chr15_98395560_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(22) TESTES |
| AAGTTCATATTAAGTACCCGTTAGGTAGAGCACATGTTGTCAATTGGCAGTTAATTTCATTAGAGAAGGAAACGAATCTGCTGTTGGGTTGGAAGAGTTAAGTTTTACTCCCCTGTGGGATCATCTGTTTAGCTTGGCCATTTGTTACTTTGGGGGGAGATTATATTGTCTGCTTCTGAACCTTAACTCGAGCACTTCAGCTCACAACTGACGATCAATACTGCTATAGTATACATGCACCGATTCTACA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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| ..................................................................................................................................................................................AACCTTAACTCGAGCACTTCAG.................................................. | 22 | 1 | 29.00 | 29.00 | 25.00 | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................AACCTTAACTCGAGCACTTCAGa................................................. | 23 | a | 28.00 | 29.00 | 2.00 | 8.00 | 7.00 | 6.00 | - | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CTGAACCTTAACTCGAGCACTTCAG.................................................. | 25 | 1 | 4.00 | 4.00 | - | - | - | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................CTCACAACTGACGATCAATACTGCTATA...................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................GAACCTTAACTCGAGCACTTC.................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TAACTCGAGCACTTCAGaaa............................................... | 20 | aaa | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTCTGAACCTTAACTCGAGCACTTCAG.................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................................................................................GAACCTTAACTCGAGCACTTCAG.................................................. | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 |
| ................................................................................................................................................................................................................TGACGATCAATACTGCTA........................ | 18 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................AACCTTAACTCGAGCACTTCAGaa................................................ | 24 | aa | 2.00 | 29.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TACTGCTATAGTATACATGCACCGATTCT... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TCACAACTGACGATCAATACTGCTATAGTA................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................ACAACTGACGATCAATACTGCTATAGTA................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................AACCTTAACTCGAGCACTTCA................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................AGGTAGAGCACATGcta................................................................................................................................................................................................................... | 17 | cta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................GAACCTTAACTCGAGCACTTCAGa................................................. | 24 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................GAACCTTAACTCGAGCACTTCA................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TTGTTACTTTGGGGGtag........................................................................................... | 18 | tag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................ACTGACGATCAATACTGCTATAGTt................... | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................ACAACTGACGATCAATACTGCTAT....................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................AACCTTAACTCGAGCACTTCAGt................................................. | 23 | t | 1.00 | 29.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGACGATCAATACTGCTATAGTATACATGC............ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| AAGTTCATATTAAGTACCCGTTAGGTAGAGCACATGTTGTCAATTGGCAGTTAATTTCATTAGAGAAGGAAACGAATCTGCTGTTGGGTTGGAAGAGTTAAGTTTTACTCCCCTGTGGGATCATCTGTTTAGCTTGGCCATTTGTTACTTTGGGGGGAGATTATATTGTCTGCTTCTGAACCTTAACTCGAGCACTTCAGCTCACAACTGACGATCAATACTGCTATAGTATACATGCACCGATTCTACA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
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