| Gene: Pfkm | ID: uc007xlv.1_intron_10_0_chr15_97954353_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.mut |
(9) TESTES |
| CATGCTGCTGTGCCCAGGATTCTAACCGAGTCCCTTTTGCGGTTCATTATTCAGGAACAGTTAAAAAGAAAGAAAGTTGCTTCTGAGAGTTTGGGGGACTGAAAGAGGTGCAGTGTAGATAAGCAGGACCCCATCGAAGCAGATCTGGTCACGCAGAATCGTGCCTTGGAGTCGTGACTGTTGCTATATTCCTCCCTTAGACCAAAGACGTGACCAAGGCTATGGATGAGAAGAGATTTGATGAAGCCAT ...........................................................................................................................((.(((.(((.....(((((((((......)))).)).)))..))).))).)).......................................................................... ..........................................................................................................................123..........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................ACCCCATCGAAGCAGATCTGGTCACGCAGAATCGTGCCTTGGAGTCGTGACT....................................................................... | 52 | 1 | 44.00 | 44.00 | 44.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GGCTATGGATGAGAAGAGATTTGATGAAGC... | 30 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GACGTGACCAAGGCTATGGATGAGAAGAGATTTG.......... | 34 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................TTGGGGGACTGAAAGAGGTGCAGTGTA..................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................GACGTGACCAAGGCTATtt......................... | 19 | tt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................CGTGACTGTTGCTATATTCCTCCCTTAG.................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| CATGCTGCTGTGCCCAGGATTCTAACCGAGTCCCTTTTGCGGTTCATTATTCAGGAACAGTTAAAAAGAAAGAAAGTTGCTTCTGAGAGTTTGGGGGACTGAAAGAGGTGCAGTGTAGATAAGCAGGACCCCATCGAAGCAGATCTGGTCACGCAGAATCGTGCCTTGGAGTCGTGACTGTTGCTATATTCCTCCCTTAGACCAAAGACGTGACCAAGGCTATGGATGAGAAGAGATTTGATGAAGCCAT ...........................................................................................................................((.(((.(((.....(((((((((......)))).)).)))..))).))).)).......................................................................... ..........................................................................................................................123..........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................TTGCTATATTCCTCCCTTAGACCAAA............................................ | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - |
| ..GCTGTGCCCAGGATgggc...................................................................................................................................................................................................................................... | 18 | gggc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - |
| .............GGATTCTAACCGccg.............................................................................................................................................................................................................................. | 15 | ccg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 |