| Gene: AK177749 | ID: uc007xll.1_intron_0_0_chr15_97794767_f | SPECIES: mm9 |
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(1) OTHER.ip |
(6) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(20) TESTES |
| GGAGGGAGGAGTGGTCCCGGGAGTAACTGCCAGCAGTTGGTGCGCCACAGGTCCGGGGGCGCCCGCGTTCCCGAGCCTCGGAGGCCTGAACGCGTTCGGAACGTGGCTTTTTTTGTGCGGGGGCGTGACCTGAGCCCGCCTCCTCGGCTGGGAGTGGAGGAGAATGGGGATCGCTGAGGCCTTTAATTAATCTGGTGCCTGTTGTTTGTGTGCCCGAGGTGCAGCCTGTTTGCCTTTTGAGTTTGCAAACAGAGGGGAGGAAGCGGCGGGGTGGGGTGGGGGAGCAGGAGGGGAGATGGGGTCTTCCGGGCAGAGAGCCTAATCCAGCGAGGGCCGTCCTATTCCAGGGGGAGGGGAGGCCAGACACGACACGGGACACTGCTGCAAAAGGAAGGCCGCAGTAGGAACTGCCAGTGTTGCGCACACAGGCACACACTTAGAACAACAGCCTCTTGCTCAGTATTTTGCACTTTATGCAGAAGTGATTTTTTTTTACCTCTAGAGCGGCCCCACATGGACACTAACACGCGCTCACCACCCCCCTCCCCATAT ..................................................................................................................................................................................(((........((((.((.((((((((((.((..((...))..))..((((((((...........))))))))........)))))))))))).)))).............(((((((...))))))).)))................................................................................................................................................................................................................................................. ..............................................................................................................................................................................175.......................................................................................................................................313............................................................................................................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................................................................................................................................................................ACGACACGGGACACTGCTGCAAAAGG................................................................................................................................................................. | 26 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TCGGAACGTGGCTTTTTTTGTGCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................TGAACGCGTTCGGAACGTGGCTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................GGAGATGGGGTCTTatgg................................................................................................................................................................................................................................................... | 18 | atgg | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................CTTTTGAGTTTGCAAACAGAGGGGA...................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..AGGGAGGAGTGGTCCCGGGAGTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................GAGAGCCTAATCCAGCGAGGGCCGTCCTA................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................AGTTGGTGCGCCACAGGTCCGGGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................TGAGTTTGCAAACAGAGGGGAGGAAG................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................CGGGACACTGCTGCAAAAGGAAGG............................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGGAAGGCCGCAGTAGGAACT............................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................GTGGAGGAGAATGGGGAgacc.......................................................................................................................................................................................................................................................................................................................................................................................... | 21 | gacc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................AGCAGTTGGTGCGCCACAGGTCCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACACTAACACGCGCTCACCACCCC........... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................................................TGAGGCCTTTAATTAATCTGGTGCCT................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................AGGCCTGAACGCGTTCGGAACGTGGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................GTGGAGGAGAATGGGGATCG........................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................AGAGAGCCTAATCCAGCGAGGGCCG........................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........TGGTCCCGGGAGTAACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TAATTAATCTGGTGCCTGTTGTTTGTttg.................................................................................................................................................................................................................................................................................................................................................... | 29 | ttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................TAATTAATCTGGTGCCTGTTGTTTGTGTG.................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................TGCAAAAGGAAGGCCGCAGTAGGAACT............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................AGTTGGTGCGCCACAGGTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCTAGAGCGGCCCCACATGGACAC............................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTGCCAGTGTT...................................................................................................................................... | 15 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - |
| GGAGGGAGGAGTGGTCCCGGGAGTAACTGCCAGCAGTTGGTGCGCCACAGGTCCGGGGGCGCCCGCGTTCCCGAGCCTCGGAGGCCTGAACGCGTTCGGAACGTGGCTTTTTTTGTGCGGGGGCGTGACCTGAGCCCGCCTCCTCGGCTGGGAGTGGAGGAGAATGGGGATCGCTGAGGCCTTTAATTAATCTGGTGCCTGTTGTTTGTGTGCCCGAGGTGCAGCCTGTTTGCCTTTTGAGTTTGCAAACAGAGGGGAGGAAGCGGCGGGGTGGGGTGGGGGAGCAGGAGGGGAGATGGGGTCTTCCGGGCAGAGAGCCTAATCCAGCGAGGGCCGTCCTATTCCAGGGGGAGGGGAGGCCAGACACGACACGGGACACTGCTGCAAAAGGAAGGCCGCAGTAGGAACTGCCAGTGTTGCGCACACAGGCACACACTTAGAACAACAGCCTCTTGCTCAGTATTTTGCACTTTATGCAGAAGTGATTTTTTTTTACCTCTAGAGCGGCCCCACATGGACACTAACACGCGCTCACCACCCCCCTCCCCATAT ..................................................................................................................................................................................(((........((((.((.((((((((((.((..((...))..))..((((((((...........))))))))........)))))))))))).)))).............(((((((...))))))).)))................................................................................................................................................................................................................................................. ..............................................................................................................................................................................175.......................................................................................................................................313............................................................................................................................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACACTTAGAACAACAGCCTCTT.................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCTTGCTCAGTATTTTGCACTTTA.............................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................GAACGCGTTCGGAACGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |