| Gene: Nup50 | ID: uc007xcq.1_intron_6_0_chr15_84768907_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(13) TESTES |
| TGCCTGTCAAGCCCCTGCTCCCCTCAGCCTGCCACACTCCCGAACACAAGAGCGGGAGGCCTTTATGGCGGTACCTTTAGCACAGTAAGAAGTCGCTTCAGGATTGACTCCTAGCCTCTTACGGAATCCTACAGCTTTGATAGATAGTTTCTCTAGTTATTTTTATGTCCTGATGAATATCTCCCTTTGCTTACTCAAAGGCAACATACTGCTGAATGTTCTGATCGCCCCCAACATGCCGTGCACCCGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................TACGGAATCCTACAGCTTTGATAGATAGTTTCTCTAGTTATTTTTATGTCCT............................................................................... | 52 | 1 | 104.00 | 104.00 | 104.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................ATACTGCTGAATGTTCTGATCGC...................... | 23 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGCAACATACTGCTGAtc................................. | 19 | tc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................................CATACTGCTGAATGTTCTGAT......................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TGAATATCTCCCTTTGCTTACTCAAA................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................TAGTTTCTCTAGTTATTTTTATGTCCTGAaa........................................................................... | 31 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................................................................TCTGATCGCCCCCAACATGCCGTGC...... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................................................................................ACATACTGCTGAATGTTCTGATCGCCCC................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................ACATACTGCTGAATGTTCTGATCGC...................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................................................................................................................................................................................TGAATGTTCTGATCGCCCCCAACATGC........... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| TGCCTGTCAAGCCCCTGCTCCCCTCAGCCTGCCACACTCCCGAACACAAGAGCGGGAGGCCTTTATGGCGGTACCTTTAGCACAGTAAGAAGTCGCTTCAGGATTGACTCCTAGCCTCTTACGGAATCCTACAGCTTTGATAGATAGTTTCTCTAGTTATTTTTATGTCCTGATGAATATCTCCCTTTGCTTACTCAAAGGCAACATACTGCTGAATGTTCTGATCGCCCCCAACATGCCGTGCACCCGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR042485(GSM539877) mouse testicular tissue [09-002]. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................TATGTCCTGATGAATggga........................................................................ | 19 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................TATGTCCTGATGAATggg........................................................................ | 18 | ggg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TATGTCCTGATGAATggaa........................................................................ | 19 | ggaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................CTCTAGTTATTTTTtaga...................................................................................... | 18 | taga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |