| Gene: Cyp2d22 | ID: uc007wzd.1_intron_4_0_chr15_82203718_r | SPECIES: mm9 |
|
|
|
(4) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(3) PIWI.mut |
(18) TESTES |
| TGGGCTTGTTGAAGGAAACTCTTAAGGAGGAAGCTGGATTCCTACCCATGGTGTGGGGCTCGGGGTGTCTGTGCCCAGATAACTTCATACAGTGGAGACTCTCGGGGGCGGGGGGAATGATGGACATGCAGGAGTGACAGGAGGAGGGCATTCTGGGAGGAGATGGACAAACATCGGTGGGAGGGGAGGGGCAGGCTGGGGTCAAGTGCTCGAAAATGGTGCCTGTGCTCCCCATCCGCGTGGCAGCCACACACATCTGTTTCCACAATATGACAGCCCTTCTGGAAGCTCAGGGCAAATGGGAAGGCTAAAGGCTGGCAGGGAGAGACTGTGTCACTAATCTAACCTGGAGGAGGCTGGGACCTGGGCTGTTCCAAGAGAGCACAGCCAGGAGGCAGCCAGGGCTCTATTGGTCCTTCTCTACTGCTCACACAGTTCCTGAATGTGTTCCCGATGCTCCTGCGCATCCCGGGGCTGGTTGGCAA ...........................................................................................................................................................................................................................................................................................................................................................(((((((((((.((((((.(((((((((...............)))).))))).))).)))...)).))))))))).............................................................. ...............................................................................................................................................................................................................................................................................................................................................336................................................................................................435................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................TGATGGACATGCAGGAGTGACAGGAG...................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 9.00 | 9.00 | 1.00 | - | 3.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................................................................................................................................................................................................................................................................................................................TAAAGGCTGGCAGGGAGAGACTGTG........................................................................................................................................................ | 25 | 1 | 8.00 | 8.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGATGGACATGCAGGAGTGACAGGA....................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 4.00 | 4.00 | 1.00 | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TACAGTGGAGACTCTCGGGGGCGG...................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......TGTTGAAGGAAACTCTTAAGGAGGAAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGATGGACATGCAGGAGTGACAGGAGG..................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TGCTCGAAAATGGTGCCTGTGCTCCCC............................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................TCACTAATCTAACCTGGAGGAGGCTG.............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................TGGAAGCTCAGGGCAAATGGGAAGG.................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................TACAGTGGAGACTCTCGGGGGCGGGG.................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................TCAGGGCAAATGGGAAGGCTAAAGGCTt........................................................................................................................................................................ | 28 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................TGTGTCACTAATCTAACCTGGAGGAGG................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................TCTAACCTGGAGGAGGCTGGGACC......................................................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TGAAGGAAACTCTTAAGGAGGAAGCTGt................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGGACAAACATCGGTGGGAGGGGAGGG....................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................TGGCAGGGAGAGACTGTGTCACTAATCT.............................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCTCACACAGTTCCTGAATGTGT..................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TACAGTGGAGACTCTCGGGGGCGGt..................................................................................................................................................................................................................................................................................................................................................................................... | 25 | t | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................CTGGGACCTGGGCTGTTCCAAGAGA........................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................AATGATGGACATGCAGGAGTGACAGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................TAAAGGCTGGCAGGGAGAGACTGTGT....................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TCTCGGGGGCGGGGGGgcg............................................................................................................................................................................................................................................................................................................................................................................... | 19 | gcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................TGACAGGAGGAGGGCATTCTGGG........................................................................................................................................................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...GCTTGTTGAAGGAAACTCTTAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGTGTTCCCGATGCTCCTGCGC.................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................TAACTTCATACAGTGGAGACTCTCGG............................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................CAAGTGCTCGAAAATGGTGCCTGTG.................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................TGGACATGCAGGAGTGACAGGAGGA.................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................CTAACCTGGAGGAGGCTGGGACCTG....................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TACAGTGGAGACTCTCGGGGGCGa...................................................................................................................................................................................................................................................................................................................................................................................... | 24 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGGACATGCAGGAGTGACAGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TACAGTGGAGACTCTCGGGGGCGGG..................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................ATACAGTGGAGACTCTCGGGGGCGG...................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGGCTTGTTGAAGGAAACTCTTAAGGAGGAAGCTGGATTCCTACCCATGGTGTGGGGCTCGGGGTGTCTGTGCCCAGATAACTTCATACAGTGGAGACTCTCGGGGGCGGGGGGAATGATGGACATGCAGGAGTGACAGGAGGAGGGCATTCTGGGAGGAGATGGACAAACATCGGTGGGAGGGGAGGGGCAGGCTGGGGTCAAGTGCTCGAAAATGGTGCCTGTGCTCCCCATCCGCGTGGCAGCCACACACATCTGTTTCCACAATATGACAGCCCTTCTGGAAGCTCAGGGCAAATGGGAAGGCTAAAGGCTGGCAGGGAGAGACTGTGTCACTAATCTAACCTGGAGGAGGCTGGGACCTGGGCTGTTCCAAGAGAGCACAGCCAGGAGGCAGCCAGGGCTCTATTGGTCCTTCTCTACTGCTCACACAGTTCCTGAATGTGTTCCCGATGCTCCTGCGCATCCCGGGGCTGGTTGGCAA ...........................................................................................................................................................................................................................................................................................................................................................(((((((((((.((((((.(((((((((...............)))).))))).))).)))...)).))))))))).............................................................. ...............................................................................................................................................................................................................................................................................................................................................336................................................................................................435................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................CAGATAACTTCATACagg........................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGGTCCTTCTCTACTGCTCACACA................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |