| Gene: Cyp2d22 | ID: uc007wzd.1_intron_1_0_chr15_82202394_r | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| CTCACAAGACTTCTCGTGACATTGAACTACAGGGCTTCCTTATCCCTAAGGTAGGCCTGGGACCCTCCAATGTCTAGTCGGTGTTGCCAGCTAGCTAGTGGCCTGAGCTGTCCACTTAAGACAGGACTGGAACTTAGGCAACTCAATTCTCAATTCCACAGAACCAACTTCTACTTGGTAAGTATGGGAAGAGAAACAGTAGCAGGAACTGTACGCTAGAATCTTCAAGGCAAGCAAGGTAAAATATGGCAGGAGTGGTTGTAACAGCCACTACCTACAGACACAGGTGACAGTGTGGACATCTGTCACTTGTCACTTCTCCCTGTCATAGTATTAAAGACAGCTAAGAAGCCACTAGGGCTAGGGTTATATGAAAGGATCCAGTCTGTGAGGTAGAGACCACGCATGTGAGCTTGGTGATCAGAGTCTAGACGGCCCCACCCCAGTCCAACCTCACACCATGTGCCTTCTGCCAGGGGACGACCCTCATCACCAACCTGTCCTCCGCGCTAAAAGATGAGACTGT .......................................................................................................................................................................................................................................................................................................................................................................................................(((((((..((((..((((((.((((........(((.....)))...........)))).))))))...))))..))))))).................................................... ........................................................................................................................................................................................................................................................................................................................................................................................377................................................................................................476................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATCAGAGTCTAGACGGCCCCAC..................................................................................... | 27 | 1 | 4.00 | 4.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TAGTCGGTGTTGCCAGCTAGCTAGTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TAGAATCTTCAAGGCAAGCAAGGTAA............................................................................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................TATGAAAGGATCCAGTCTGTGAGGTA................................................................................................................................... | 26 | 2 | 2.00 | 2.00 | 1.00 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ....................................................................................................................TAAGACAGGACTGGAACTTAGGCAAC................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......AGACTTCTCGTGACATTGAACTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTCCGCGCTAAAAGATGAGACTG. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCAGAGTCTAGACGGCCCCACCC................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATCAGAGTCTAGACGGCCCCACC.................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................TAGGGCTAGGGTTATATGAAAGGATC................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCCGCGCTAAAAGATGAGACTGTctc | 29 | ctc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATCAGAGTCTAGACGGCCCCc...................................................................................... | 26 | c | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ACAGGACTGGAACTTAGGCAACTC.............................................................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TAGAATCTTCAAGGCAAGCAAGGTAAAATA........................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGGGACCCTCCAATGTCTAGTCGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................TGGGACCCTCCAATGTCTAGTCGGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................CAGGACTGGAACTTAGGCAACTCAATTCT........................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........TTCTCGTGACATTGAACTACAGGGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TAGAATCTTCAAGGCAAGCAAGGTAAAA.......................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................AGGAACTGTACGCTAGAATCTTCAAGGC....................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................TACAGACACAGGTGACAGTGTGGACA................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................TACGCTAGAATCTTCAAGGCAAGCAAG................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................TAACAGCCACTACCTACAGACACAGGT.............................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TACGCTAGAATCTTCAAGGCAAGCAAGG............................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TGGGAAGAGAAACAGTAGCAGGAAC............................................................................................................................................................................................................................................................................................................................. | 25 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGAAAGGATCCAGTCTGTGAGGTAGA................................................................................................................................. | 26 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................TATATGAAAGGATCCAGTCTGTGAGGT.................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TGGGAAGAGAAACAGTAGCAGGAACTGT.......................................................................................................................................................................................................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGAGGTAGAG................................................................................................................................ | 15 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.08 |
| CTCACAAGACTTCTCGTGACATTGAACTACAGGGCTTCCTTATCCCTAAGGTAGGCCTGGGACCCTCCAATGTCTAGTCGGTGTTGCCAGCTAGCTAGTGGCCTGAGCTGTCCACTTAAGACAGGACTGGAACTTAGGCAACTCAATTCTCAATTCCACAGAACCAACTTCTACTTGGTAAGTATGGGAAGAGAAACAGTAGCAGGAACTGTACGCTAGAATCTTCAAGGCAAGCAAGGTAAAATATGGCAGGAGTGGTTGTAACAGCCACTACCTACAGACACAGGTGACAGTGTGGACATCTGTCACTTGTCACTTCTCCCTGTCATAGTATTAAAGACAGCTAAGAAGCCACTAGGGCTAGGGTTATATGAAAGGATCCAGTCTGTGAGGTAGAGACCACGCATGTGAGCTTGGTGATCAGAGTCTAGACGGCCCCACCCCAGTCCAACCTCACACCATGTGCCTTCTGCCAGGGGACGACCCTCATCACCAACCTGTCCTCCGCGCTAAAAGATGAGACTGT .......................................................................................................................................................................................................................................................................................................................................................................................................(((((((..((((..((((((.((((........(((.....)))...........)))).))))))...))))..))))))).................................................... ........................................................................................................................................................................................................................................................................................................................................................................................377................................................................................................476................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................AATTCCACAGAACCAACTTCTACTTGGTA.......................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................CTCAATTCCACAGAACCAACTTCTAt................................................................................................................................................................................................................................................................................................................................................................. | 26 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................TCCTTATCCCTAAttgt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 17 | ttgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |