| Gene: Cbx7 | ID: uc007wuv.1_intron_1_0_chr15_79748907_r | SPECIES: mm9 |
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(4) OTHER.mut |
(2) PIWI.ip |
(13) TESTES |
| GCAGACCCCCGGAGACTGGGAGCCTATGGAGCAAGCCCCCGAGGAGGAGGGTAAGTCAGCCATCCTGAGACCTCAAAGCCGGGAAGGTCCCTGACCCCTGTCCAGGGGGCCTGGAAACCCAACAGTGGAGCAGGCAGGACTGACTGGACCTGGCCCCTGCCCATTCTGCTATAGCTAGCTAGGCAGGTGCACATGCGCCCTCCTAAAGCATCCTGCTTCAAGCGTGTGGGGGGATGGGCAGCGTGCTACCATTCACGACTTCTGACTGCCCACTCGGTGCCGAGTGGTGCCTGTACCTCACCCGTGTCTTTGTTCCATGGCTGCAGCAGAAGCAGACCTGACCAATGGGCCGCCTCCCTGGACACCCACGCTCCCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................................................................................................................TTGTTCCATGGCTGCAGCAGAAGCAG......................................... | 26 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................TTCACGACTTCTGACTGCCCACTCGG................................................................................................... | 26 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TGGAAACCCAACAGTGGAGCAGGCAG............................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................TAGCTAGGCAGGTGCACATGCGCCCTC.............................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TTGTTCCATGGCTGCAGCAGAAGCAGAC....................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................TTTGTTCCATGGCTGCAGCAGAAGCA.......................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAGTCAGCCATCCTGAGACCTCAAAGC......................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................TGGAGCAAGCCCCCGAGGAGGAGGaagt.................................................................................................................................................................................................................................................................................................................................. | 28 | aagt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................TAGCTAGCTAGGCAGGTGCACATGCGC.................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........GGAGACTGGGAGCCTATGGAGCAAGC.................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................TTCACGACTTCTGACTGCCCACTCG.................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................TGGAGCAAGCCCCCGAGGAGGAGGcaga.................................................................................................................................................................................................................................................................................................................................. | 28 | caga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................AAGTCAGCCATCCTGAGACCTCAAAGC......................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGACCCCTGTCCAGtgct........................................................................................................................................................................................................................................................................... | 18 | tgct | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TTCTGCTATAGCTAGCTAGGCAGGT............................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................GGTGCCGAGTGGTGgctt................................................................................... | 18 | gctt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................GTAAGTCAGCCATCCTGAGACCTCAAAGg......................................................................................................................................................................................................................................................................................................... | 29 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................................................................AAGCATCCTGCTTCAAGCGTGTGGGG................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................................................................................TCCTAAAGCATCCTGCTTCAAGCGTG...................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTAAGTCAGCCATCCTGAGACCTCAAAGC......................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................ACTGACTGGACCTGGCC............................................................................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........GGAGACTGGGAGCCTATGGAGCAAGCC................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................AACAGTGGAGCAGGCAGGACTGACTGGAC................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| GCAGACCCCCGGAGACTGGGAGCCTATGGAGCAAGCCCCCGAGGAGGAGGGTAAGTCAGCCATCCTGAGACCTCAAAGCCGGGAAGGTCCCTGACCCCTGTCCAGGGGGCCTGGAAACCCAACAGTGGAGCAGGCAGGACTGACTGGACCTGGCCCCTGCCCATTCTGCTATAGCTAGCTAGGCAGGTGCACATGCGCCCTCCTAAAGCATCCTGCTTCAAGCGTGTGGGGGGATGGGCAGCGTGCTACCATTCACGACTTCTGACTGCCCACTCGGTGCCGAGTGGTGCCTGTACCTCACCCGTGTCTTTGTTCCATGGCTGCAGCAGAAGCAGACCTGACCAATGGGCCGCCTCCCTGGACACCCACGCTCCCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................................................CTTCTGACTGCCCACTCGGTGCCGA............................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................GCCATCCTGAGACCTCAAAGCCGGGA.................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................GCGTGCTACCATTCACGACTTCTGA............................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................................................................................................................................................................................................GCCCTCCTAAAGCATCCTGCTTCAA........................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................TGCTACCATTCACGACTTCTGACTGC........................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |