| Gene: Ddx17 | ID: uc007wtq.1_intron_6_0_chr15_79369409_r | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| CATTTACGGAGGTGCTCCTAAAGGTCCCCAAATTCGAGACTTGGAAAGAGGTAAAAAGAATTTTCATGCTTGCCAATTTCTATAAATGAAAATGAACATTGGGTTCTTCTAAGAAAATTTCAGTATTTTCAATAGTGTAGAAATTCTTGGGATTGTGGGTCTATTAGATATTTTGTTGGAGGAAATTTGTAACTAGAGACTTAATCTACTGTTTGTGACCCCTCTTCCATCATGCTCATTGGATACTTAGTGTAAGTTTAGCAATTGCTATAACATTGAATGCAGCCACTAGGGCTGGGGCTTTCTAGTTACTGTGTGCTGAGGTTTGGATATTGTATAAGAAAGGGTTCTTCATGGACTAGAGTTTTTGTTGTTATTGTTGCTTTATAGGTGTTGAGATTTGCATAGCCACTCCTGGGCGCCTAATAGATTTCCTGGAG ....................................................................................................................................................................................................................................................................................................(((((((....))))))).........((((((...((((....(((((((..(((((.....)))))....)))))))...))))...))))))..................................................... ..................................................................................................................................................................................................................................................................................................291................................................................................................390................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| .....................................................................................................................TTTCAGTATTTTCAATAGTGTAGAAATTCTTGGGATTGTGGGTCTATTAGAT............................................................................................................................................................................................................................................................................... | 52 | 1 | 47.00 | 47.00 | 47.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CCAAATTCGAGACTTGGAAAGAGGTgt.................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | gt | 8.00 | 0.00 | - | - | 1.00 | 1.00 | - | 4.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| ...............................ATTCGAGACTTGGAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................AAATTCGAGACTTGGAAAGAGGTgtt................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | gtt | 4.00 | 2.00 | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CCAAATTCGAGACTTGGAAAGAGGTg................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | g | 4.00 | 0.00 | - | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................AATTCGAGACTTGGAAAGAGGTgtt................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | gtt | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CCAAATTCGAGACTTGGAAAGAGGTgtt................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | gtt | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TCGAGACTTGGAAAGAGG..................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................AAATTCGAGACTTGGAAAGAGGT.................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ............................CAAATTCGAGACTTGGAAAGAGGTgtt................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | gtt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................GCTTTCTAGTTACTGTGTGCTGAG..................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TTCGAGACTTGGAAAGAGG..................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGCATAGCCACTCCTGGGCGCCT................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................CGAGACTTGGAAAtctg..................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | tctg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................TGTGGGTCTATTAGATATTTTGTTGG..................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................AAATTCGAGACTTGGAAAGAGGTg................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | g | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................................................................................................................................................................................................TGCTGAGGTTTGGATgata......................................................................................................... | 19 | gata | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................ATTCGAGACTTGGAAAGAGGTg................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | g | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................TAGTTACTGTGTGCTGAGGT................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................AGGTGTTGAGATTTGCA................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................AGGTCCCCAAATTCGAGACTTGGAAAGA....................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....TACGGAGGTGCTCCTAAAGGTCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................................................................................................................GTGCTGAGGTTTGGATATTGTATAAGAAAGGG............................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCTGGGCGCCTAATAGcc......... | 21 | cc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................CAAATTCGAGACTTGGAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTGAGATTTGCATAGCCACT........................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................AGAGTTTTTGTTGTTATT.............................................................. | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................GGACTAGAGTTTTTG...................................................................... | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |
| CATTTACGGAGGTGCTCCTAAAGGTCCCCAAATTCGAGACTTGGAAAGAGGTAAAAAGAATTTTCATGCTTGCCAATTTCTATAAATGAAAATGAACATTGGGTTCTTCTAAGAAAATTTCAGTATTTTCAATAGTGTAGAAATTCTTGGGATTGTGGGTCTATTAGATATTTTGTTGGAGGAAATTTGTAACTAGAGACTTAATCTACTGTTTGTGACCCCTCTTCCATCATGCTCATTGGATACTTAGTGTAAGTTTAGCAATTGCTATAACATTGAATGCAGCCACTAGGGCTGGGGCTTTCTAGTTACTGTGTGCTGAGGTTTGGATATTGTATAAGAAAGGGTTCTTCATGGACTAGAGTTTTTGTTGTTATTGTTGCTTTATAGGTGTTGAGATTTGCATAGCCACTCCTGGGCGCCTAATAGATTTCCTGGAG ....................................................................................................................................................................................................................................................................................................(((((((....))))))).........((((((...((((....(((((((..(((((.....)))))....)))))))...))))...))))))..................................................... ..................................................................................................................................................................................................................................................................................................291................................................................................................390................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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