| Gene: D15Wsu169e | ID: uc007wmh.1_intron_5_0_chr15_76560887_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(22) TESTES |
| CCTAGAGGGCTATATCTACCGGCATATGGACCCTGTTAACGACACCAAAGGTAAGAGCCAGCATGTGGGGCCCTCAGCACCCCAGCTTTGCTGCTGCTGAGGTAAGGGCTATAGAGAGGGCTGTTAGCCATGCTGGCTGGCACTTGCCAGTTCCAAGAAGATATGCAGTCCCCTGGAAAATCCCAAAGCCTAGTTTCCTCTGCCTTGTAGCCTCAGAGAACCTGAACTCTGGCAGAAATACGATGTATAA ............................................................................................(((((...((((..((((((((......)))).)))).)))).((((((....)))))).............)))))................................................................................. ............................................................................................93.................................................................................176........................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................TGTTAACGACACCAAAGGTAAGAGCCAGC............................................................................................................................................................................................ | 29 | 1 | 40.00 | 40.00 | 21.00 | 10.00 | - | 4.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................TGTAGCCTCAGAGAACCTGAACTCTGGC................. | 28 | 1 | 27.00 | 27.00 | 11.00 | 6.00 | 1.00 | 2.00 | 1.00 | - | 2.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGAACTCTGGCAGAAATACGATGTATA. | 27 | 1 | 25.00 | 25.00 | 8.00 | 7.00 | 4.00 | 1.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TAACGACACCAAAGGTAAGAGCCAGCAT.......................................................................................................................................................................................... | 28 | 1 | 19.00 | 19.00 | 8.00 | 10.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGAACTCTGGCAGAAATACGATGTATAA | 28 | 1 | 14.00 | 14.00 | 5.00 | 7.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................ACGACACCAAAGGTAAGAGCCAGCATG......................................................................................................................................................................................... | 27 | 1 | 12.00 | 12.00 | 1.00 | 1.00 | - | - | - | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGCCAGTTCCAAGAAGATATGCAGTCCC.............................................................................. | 28 | 1 | 9.00 | 9.00 | 4.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGAACTCTGGCAGAAATACGATGTAT.. | 26 | 1 | 8.00 | 8.00 | 2.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AACCTGAACTCTGGCAGAAATACGATG..... | 27 | 1 | 7.00 | 7.00 | 4.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TATCTACCGGCATATGGACCCTGTTAAC.................................................................................................................................................................................................................. | 28 | 1 | 7.00 | 7.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TAACGACACCAAAGGTAAGAGCCAGCA........................................................................................................................................................................................... | 27 | 1 | 7.00 | 7.00 | 2.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GAGAACCTGAACTCTGGCAGAAATACG........ | 27 | 1 | 5.00 | 5.00 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGAACTCTGGCAGAAATACGATGTA... | 25 | 1 | 5.00 | 5.00 | - | 1.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................ACCTGAACTCTGGCAGAAATACGATGT.... | 27 | 1 | 5.00 | 5.00 | 3.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TAGCCTCAGAGAACCTGAACTCTGGC................. | 26 | 1 | 5.00 | 5.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................TGAGGTAAGGGCTATAGAGAGGGCT................................................................................................................................ | 25 | 1 | 5.00 | 5.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TAACGACACCAAAGGTAAGAGCCAGC............................................................................................................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TATGGACCCTGTTAACGACACCAAAGG....................................................................................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | - | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GAGAACCTGAACTCTGGCAGAAATACGAT...... | 29 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGAGGTAAGGGCTATAGAGAGGGC................................................................................................................................. | 24 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................TGCCAGTTCCAAGAAGATATGCAGTCCCC............................................................................. | 29 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TGCTGCTGCTGAGGTAAGGGCTATAGA....................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................TGGACCCTGTTAACGACACCAAAGGTAAGAGC................................................................................................................................................................................................ | 32 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................AGCTTTGCTGCTGCTGAGGTAAGGGCTATAGAGAGGGCTGTTAGCCATGCTG................................................................................................................... | 52 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGTAGCCTCAGAGAACCTGAACTCTGGCA................ | 29 | 1 | 3.00 | 3.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGCTGAGGTAAGGGCTATAGAGAGGGC................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TGCCTTGTAGCCTCAGAGAACCTGAACTC..................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGCTGAGGTAAGGGCTATAGAGAGGGCT................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGCCAGTTCCAAGAAGATATGCAGTCC............................................................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................................................................................TCAGAGAACCTGAACTCTGGCAGAAAT........... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TCAGAGAACCTGAACTCTGGCAGAAATA.......... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TATCTACCGGCATATGGACCCTGTT..................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TCCAAGAAGATATGCAGTCCCCTGGA......................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGAGGTAAGGGCTATAGAGAGGGCTt............................................................................................................................... | 26 | t | 2.00 | 5.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TTCCAAGAAGATATGCAGTCCCCTGG.......................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGCTGAGGTAAGGGCTATAGAGAaggc................................................................................................................................. | 27 | aggc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TAGAGAGGGCTGTTAGCCATGCTGGCTGGC............................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TAGAGAGGGCTGTTAGCCATGCTGG.................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TGTTAACGACACCAAAGGTAAGAGCCAG............................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GAACCTGAACTCTGGCAGAAATACGATGT.... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TCAGAGAACCTGAACTCTGGCAGAAt............ | 26 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TGGACCCTGTTAACGACACCAAAGGTAAGAGCC............................................................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TCCAAGAAGATATGCAGTCCCCTGGAA........................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................................................................................GTTTCCTCTGCCTTGTAGCCTCAGAGA............................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAGAGAACCTGAACTCTGGCAGAAATA.......... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GAACCTGAACTCTGGCAGAAATACGATG..... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AACCTGAACTCTGGCAGAAATACGATGTA... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................AGAGAACCTGAACTCTGGCAGAAATACG........ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................CCCAAAGCCTAGTTTCCTCTGCCTTGTAGC....................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAGAGAACCTGAACTCTGGCAG............... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................GTAGCCTCAGAGAACCTGAACTCTGGC................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TAGAGGGCTATATCTACCGGCATAT............................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TACCGGCATATGGACCCTGTTAACGAC............................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAGAGAACCTGAACTCTGGCAGAAAT........... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................CCAGTTCCAAGAAGATATGCAGTCCCC............................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TAGAGGGCTATATCTACCGGCATATG.............................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TGCTGCTGAGGTAAGGGCTATAGAGA..................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................ACTTGCCAGTTCCAAGAAGATATGCAG.................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TATGGACCCTGTTAACGACACCAAAG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TAGAGGGCTATATCTACCGGCATATGGAC........................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TAGAGAGGGCTGTTAGCCATGCTGGCTGG.............................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TAGAGGGCTATATCTACCGGCATATGGA............................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GAACCTGAACTCTGGCAGAAATACGAT...... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGAGGTAAGGGCTATAGAGAGGGCTG............................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AACCTGAACTCTGGCAGAAATACGATGTt... | 29 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TATCTACCGGCATATGGACCC......................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................GCTGAGGTAAGGGCTATAGAGAGGGCa................................................................................................................................ | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................................TGTAGCCTCAGAGAACCTGAACTCTGaa................. | 28 | aa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TATCTACCGGCATATGGACCCTGTTA.................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GGTAAGGGCTATAGAGAGGGCTG............................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TGTTAACGACACCAAAGGTAAGAGCCA.............................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGAACTCTGGCAGAAATACGA....... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TAGAGGGCTATATCTACCGGCATATGGACC.......................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................CACCAAAGGTAAGAGCCAGCATGTGGGGC................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................AGAAGATATGCAGTCCCCTGGAAAATCC................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGTAGCCTCAGAGAACCTGAACTCTGG.................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................CCTGAACTCTGGCAGAAATACGATGT.... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................CAGTTCCAAGAAGATATGCAGTCCCCT............................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GAGAACCTGAACTCTGGCAGAAATACGA....... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTAAGAGCCAGCATGTGGGGCCCT................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................GCCTCAGAGAACCTGAACTCTGGCAGA.............. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTCCTCTGCCTTGTAGCCTCAGAGAACC............................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................TAACGACACCAAAGGTAAGAGCCAGCATG......................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GAGAACCTGAACTCTGGCAGAAATAC......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................TGGACCCTGTTAACGACACCAAAGGTA..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................GAGGTAAGGGCTATAGAGAGGGCTGT.............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TAAGGGCTATAGAGAGGGCTGTTAGa.......................................................................................................................... | 26 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................AGAACCTGAACTCTGGCAGAAATACGAT...... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................ATATGGACCCTGTTAACGACACCAAAGt....................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................AACGACACCAAAGGTAAGAGCCAGCAT.......................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GAAGATATGCAGTCCCCTGGAAAATCCC.................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AACCTGAACTCTGGCAGAAATACGAT...... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGCAGTCCCCTGGAAAATCCCAAAGCCT........................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CTCAGAGAACCTGAACTCTGGCAGAAATA.......... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TATGGACCCTGTTAA................................................................................................................................................................................................................... | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - |
| CCTAGAGGGCTATATCTACCGGCATATGGACCCTGTTAACGACACCAAAGGTAAGAGCCAGCATGTGGGGCCCTCAGCACCCCAGCTTTGCTGCTGCTGAGGTAAGGGCTATAGAGAGGGCTGTTAGCCATGCTGGCTGGCACTTGCCAGTTCCAAGAAGATATGCAGTCCCCTGGAAAATCCCAAAGCCTAGTTTCCTCTGCCTTGTAGCCTCAGAGAACCTGAACTCTGGCAGAAATACGATGTATAA ............................................................................................(((((...((((..((((((((......)))).)))).)))).((((((....)))))).............)))))................................................................................. ............................................................................................93.................................................................................176........................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................ACTCTGGCAGAAATAC......... | 16 | 4 | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |