| Gene: D15Wsu169e | ID: uc007wmh.1_intron_1_0_chr15_76555923_r | SPECIES: mm9 |
|
|
(5) OTHER.mut |
(2) PIWI.ip |
(20) TESTES |
| GGTGGATCAGTGGAAGGTGCCTACAGGCCTGGAGGATCCCCATGTCCCTGGTGAGCCCCACATATACTCAGTATTTTTGAAGAGTTGGCTTGCATGCATATCCCAGAAAGCAGATAACCATGCAGGCGGGACTCCTGTTCGGGATCACCCTATGGCCTTGTCCCCCTGTCCTGTGGCTGCATCTAACCATCCTTCACCCCTGGCGCCTATCTTCAGAAGAATTCTAAACATCCTCCCACACTGTTGTATAGCCATTGTGGACACATGCACACATACCTGTACTGTCAAGAATGATCCCAGGTCCTCCAGCAGCTAGTGTCTCTGAGATCTGGGCTCAGGCTGTACAGCTTTAGCTAGAGGGACCCTTTCCAGCCTGTTCCATATTCTCCCATACACCCTGTTTCTCTGGATGTGGCCTCTGGTGGATGCTTGGCTTAGGGGTTCCCAAGCCAAGACCACCTAAGTCACTCCCACCCTCAGCATCGCTGCTGAAGCTGTGGTATCGGGAGCTGGAAGAGCCCTTGATTCCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGTGGCCTCTGGTGGATG...................................................................................................... | 22 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTCTGGTGGATGCTTGGt................................................................................................ | 24 | t | 5.00 | 3.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTCTGGTGGATGCTTGGC................................................................................................ | 24 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTCTGGTGGATGCTTGG................................................................................................. | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................TAGTGTCTCTGAGATCTGGGCTCAGGC.............................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCTGTGGTATCGGGAGCTGGA................ | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGTGGCCTCTGGTGGATGa..................................................................................................... | 23 | a | 2.00 | 6.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTCTGGTGGATGCTTGGCTT.............................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGCTGTGGTATCGGGAGCTGGAA............... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TGGATCAGTGGAAGGTGCCTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGTGGATGCTTGGCTTAtt........................................................................................... | 22 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCTGCTGAAGCTGTGGTATCGGG....................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGCCTCTGGTGGATGCTT................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTATCGGGAGCTGGAAGAG............ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................TAGCCATTGTGGACACATGCACACATAC.............................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGGAAGAGCCCTTGATTCC. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TGTATAGCCATTGTGGACACATGCACAC.................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................GAATGATCCCAGGcaga................................................................................................................................................................................................................................. | 17 | caga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAAGCTGTGGTATCGGGAGC.................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTCTGGTGGATGCTTGGtttt............................................................................................. | 27 | tttt | 1.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTCTGGTGGAaaaa.................................................................................................... | 20 | aaaa | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGTGGATCAGTGGAAGGTGCCTACAGGCCTGGAGGATCCCCATGTCCCTGGTGAGCCCCACATATACTCAGTATTTTTGAAGAGTTGGCTTGCATGCATATCCCAGAAAGCAGATAACCATGCAGGCGGGACTCCTGTTCGGGATCACCCTATGGCCTTGTCCCCCTGTCCTGTGGCTGCATCTAACCATCCTTCACCCCTGGCGCCTATCTTCAGAAGAATTCTAAACATCCTCCCACACTGTTGTATAGCCATTGTGGACACATGCACACATACCTGTACTGTCAAGAATGATCCCAGGTCCTCCAGCAGCTAGTGTCTCTGAGATCTGGGCTCAGGCTGTACAGCTTTAGCTAGAGGGACCCTTTCCAGCCTGTTCCATATTCTCCCATACACCCTGTTTCTCTGGATGTGGCCTCTGGTGGATGCTTGGCTTAGGGGTTCCCAAGCCAAGACCACCTAAGTCACTCCCACCCTCAGCATCGCTGCTGAAGCTGTGGTATCGGGAGCTGGAAGAGCCCTTGATTCCT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................................................................................................................................................................GTTCCATATTCTCCCAgtag........................................................................................................................................... | 20 | gtag | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................CCCTTTCCAGCCTGTTCCATATTCTCCCA........................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................GGCGCCTATCTTCAGAAGAATTCTAAACA............................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................GGCGCCTATCTTCAGAAGAATTCTAA............................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TTCCAGCCTGTTCCATATTCTCCCA........................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GGCGCCTATCTTCAGAAGAATTCTAAACAt............................................................................................................................................................................................................................................................................................................ | 30 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................GGCGCCTATCTTCAGAAGAATTCTA................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................CCTGGCGCCTATCTTCAGAAGAATTCTA................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................TGATCCCAGGTCCTCCag............................................................................................................................................................................................................................... | 18 | ag | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................GTTCCATATTCTCCCAgga........................................................................................................................................... | 19 | gga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................CTTTCCAGCCTGTTCCATATTCTCCCA........................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |