| Gene: Dgat1 | ID: uc007wkn.1_intron_15_0_chr15_76337084_r.3p | SPECIES: mm9 |
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(1) OTHER.ip |
(3) OTHER.mut |
(6) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(28) TESTES |
| CTAGAGGGAAAGGTCTCTATGTGATTCTGAGACCTTCTCCTCTTGTAGCTACATAACCACTGGAATGGCCTTGTCTGAGTCCTCTTCCTGTGTGCAATGGTAGTGAACTCTTGGCAGAAAAGATACCTGGGCAGGAGTGGGTTTGTCCTTTTCCTGCTCGTCTTTGCTTACTGGGCAGGATCCTGTCTCCTTTTTGCCAGGTGCCATCGTCTGCAAGATTCTTTGTTCAGCTCAGACAGTGGTTTCAGCA .........................................................(((.((((.((.(((....))).))..)))).)))(((...((.((....))))..)))...................................................................................................................................... ................................................49.............................................................................128........................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAGT.......... | 29 | 1 | 44.00 | 44.00 | 8.00 | 8.00 | 7.00 | 9.00 | 6.00 | 2.00 | 1.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAGTG......... | 30 | 1 | 31.00 | 31.00 | - | - | 10.00 | 6.00 | 7.00 | - | - | 4.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACA............ | 27 | 1 | 31.00 | 31.00 | 12.00 | 7.00 | - | - | - | 4.00 | 3.00 | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAGTGt........ | 31 | t | 26.00 | 31.00 | - | - | 12.00 | 9.00 | 2.00 | - | - | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAAGATTCTTTGTTCAGCTCAGACAGT.......... | 27 | 1 | 19.00 | 19.00 | 8.00 | 3.00 | - | - | - | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGAC............. | 26 | 1 | 11.00 | 11.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | 6.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGTAGTGAACTCTTGGCAGAAAAGAT.............................................................................................................................. | 27 | 1 | 7.00 | 7.00 | 2.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAAGATTCTTTGTTCAGCTCAGACAGTG......... | 28 | 1 | 5.00 | 5.00 | 1.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAG........... | 28 | 1 | 5.00 | 5.00 | 2.00 | - | - | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TTCTTTGTTCAGCTCAGACAGTGGTT...... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................................TGGTAGTGAACTCTTGGCAGAAAAGA............................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................AGATTCTTTGTTCAGCTCAGACAGTGGTT...... | 29 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAAGATTCTTTGTTCAGCTCAGACAGTGt........ | 29 | t | 3.00 | 5.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAGTt......... | 30 | t | 3.00 | 44.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................TGCAATGGTAGTGAACTCTTGGCAGA.................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................AAGATTCTTTGTTCAGCTCAGACAGT.......... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................AGATTCTTTGTTCAGCTCAGACAGTG......... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGTAGTGAACTCTTGGCAGAAAAGATACC........................................................................................................................... | 30 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TTCTTTGTTCAGCTCAGACAGTGGTTTCAGC. | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TTTGTTCAGCTCAGACAGTGGTTTCAGC. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGC................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAAGATTCTTTGTTCAGCTCAGACAGTGG........ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAGTGG........ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TAACCACTGGAATGGCCTTGT................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................TGGTAGTGAACTCTTGGCAGAAAAGATA............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TTCTTTGTTCAGCTCAGACAGTGG........ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TTCTTTGTTCAGCTCAGACAGTGGTTT..... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAGTGaa....... | 32 | aa | 1.00 | 31.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................TGCAATGGTAGTGAACTCTTGGCAGAAA.................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCTTTGTTCAGCTCAGACAGTGGTTTCAGCA | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAt........... | 28 | t | 1.00 | 31.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................CAAGATTCTTTGTTCAGCTCAGACAGTt......... | 28 | t | 1.00 | 19.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TTTGTTCAGCTCAGACAGTGGTTTCA... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACt............ | 27 | t | 1.00 | 11.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TTCTTTGTTCAGCTCAGACAGTGGT....... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TAACCACTGGAATGGCCTTGTCggag........................................................................................................................................................................... | 26 | ggag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................AATGGTAGTGAACTCTTGGCAGAAAA................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................AGATTCTTTGTTCAGCTCAGACAGTGGTTT..... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGCAAGATTCTTTGTTCAGCTCAGACAGTtt........ | 31 | tt | 1.00 | 44.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGTAGTGAACTCTTGGCAGAAAAGATt............................................................................................................................. | 28 | t | 1.00 | 7.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCTTTGTTCAGCTCAGACAGTGGTTTCAGC. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................................................................................TGAACTCTTGGCAGAAAAGATACCTGGG....................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GCAAGATTCTTTGTTCAGCTCAGACAGT.......... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TGTGATTCTGAGACCTTCTCCTCTTG............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGAACTCTTGGCAGAAAAGATACCTGG........................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TTTGTTCAGCTCAGACAGTGGTTTCAGCAtt | 31 | tt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTAGAGGGAAAGGTCTCTATGTGATTCTGAGACCTTCTCCTCTTGTAGCTACATAACCACTGGAATGGCCTTGTCTGAGTCCTCTTCCTGTGTGCAATGGTAGTGAACTCTTGGCAGAAAAGATACCTGGGCAGGAGTGGGTTTGTCCTTTTCCTGCTCGTCTTTGCTTACTGGGCAGGATCCTGTCTCCTTTTTGCCAGGTGCCATCGTCTGCAAGATTCTTTGTTCAGCTCAGACAGTGGTTTCAGCA .........................................................(((.((((.((.(((....))).))..)))).)))(((...((.((....))))..)))...................................................................................................................................... ................................................49.............................................................................128........................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................TCGTCTGCAAGATTCTTTGTTCAGCTCA................ | 28 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TTTGCCAGGTGCCATCGTCTGCAAGA................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................ATCGTCTGCAAGATTCTTTGTTCA..................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCCTTTTTGCCAGGTGCCATCGTCTGCA................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................GTCTCCTTTTTGCCAGGTGCCATCGTCT...................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................AGTCCTCTTCCTGTGTGCAATGGTAGTGA................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................CTGCAAGATTCTTTGTTCAGCTCAGAC............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................ATCGTCTGCAAGATTCTTTGTTCAGCTCA................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TGTCCTTTTCCTGCTCGTCTTTGCTTA................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |