| Gene: mKIAA1833 | ID: uc007wkc.1_intron_23_0_chr15_76262829_f.3p | SPECIES: mm9 |
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(8) OTHER.mut |
(2) PIWI.ip |
(20) TESTES |
| AGGCCCTGGAACTTCAGGTCCTAGGTTTCTCCTCAGTCAGGAGGCTGCTGTCGGGCTTTTTGGTCACAGTGAACAGCGGCTCTGGCTGTTCAAGAAAGGGCGTGAACTCCAGTTTCTGAGGCTGGGCTCTGCTCTGTGGCTACTCTGGGGCAGTTCTGGGGGCAGATATGCAAACCTCCTGCAGCCAGCTCTTCCCCTAGGACCCGGCCCTGAAGCTCTGCCTCGTCCAGAGCCTGTGCATGGTCAGCCA ..................................................................................................................................................((((.((..((((..((((.............))))..))))..)).))))..................................................... ............................................................................................................................................141........................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................TGGGGCAGTTCTGGGGGCAGA.................................................................................... | 21 | 1 | 18.00 | 18.00 | 16.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAGA.................................................................................... | 23 | 1 | 13.00 | 13.00 | 12.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................CTGGGGCAGTTCTGGGGGCAGA.................................................................................... | 22 | 1 | 9.00 | 9.00 | 4.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................TGGGGCAGTTCTGGGGGCAGAa................................................................................... | 22 | a | 8.00 | 18.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGGGGCAGTTCTGGGGGCAGATATGC............................................................................... | 26 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGCAGCCAGCTCTTCCCCTAGt................................................. | 22 | t | 5.00 | 0.00 | - | - | - | - | - | - | 2.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAGATA.................................................................................. | 25 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGGGGCAGTTCTGGGGGCAGATtaga............................................................................... | 26 | taga | 3.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TACTCTGGGGCAGTTCTGGGGGCAGt.................................................................................... | 26 | t | 3.00 | 0.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TGGGGCAGTTCTGGGGGCAGATt.................................................................................. | 23 | t | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGCAGCCAGCTCTTCCCCTAGttt............................................... | 24 | ttt | 2.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAt..................................................................................... | 22 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................TGGGGCAGTTCTGGGGGCAGAT................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGCAGCCAGCTCTTCCCCTAGaatt.............................................. | 25 | aatt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGCAGCCAGCTCTTCCCCTAt.................................................. | 21 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................TACTCTGGGGCAGTTCTGGGGGCAGA.................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGACCCGGCCCTGAAGCT................................. | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TCCTCAGTCAGGAGGCccc.......................................................................................................................................................................................................... | 19 | ccc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAata................................................................................... | 24 | ata | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................CCTCAGTCAGGAGGtccc.......................................................................................................................................................................................................... | 18 | tccc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TACTCTGGGGCAGTTCTGGGGGCAGg.................................................................................... | 26 | g | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGCAGCCAGCTCTTCCCCTAGata............................................... | 24 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAGAa................................................................................... | 24 | a | 1.00 | 13.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAGAT................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAG..................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TCCTCAGTCAGGAGGtccc.......................................................................................................................................................................................................... | 19 | tccc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCTGGGGCAGTTCTGGGGGCAGtat.................................................................................. | 25 | tat | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGGCCCTGGAACTTCAGGTCCTAGGTTTCTCCTCAGTCAGGAGGCTGCTGTCGGGCTTTTTGGTCACAGTGAACAGCGGCTCTGGCTGTTCAAGAAAGGGCGTGAACTCCAGTTTCTGAGGCTGGGCTCTGCTCTGTGGCTACTCTGGGGCAGTTCTGGGGGCAGATATGCAAACCTCCTGCAGCCAGCTCTTCCCCTAGGACCCGGCCCTGAAGCTCTGCCTCGTCCAGAGCCTGTGCATGGTCAGCCA ..................................................................................................................................................((((.((..((((..((((.............))))..))))..)).))))..................................................... ............................................................................................................................................141........................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................GAAGCTCTGCCTCGTCCAGAGCCTGTGCA.......... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................................................................................................................GCTCTGCCTCGTCCAG.................... | 16 | 3 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 |