| Gene: Eef1d | ID: uc007whl.1_intron_4_0_chr15_75727350_r | SPECIES: mm9 |
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(1) OTHER.mut |
(1) OVARY |
(7) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| TGATGCTGCCCAACTCCCCTGAGGCCCTGGGCCAGGCCACCCCTGGGACTGTAAGTCCTGTCCTGTTGCTCTCTCTGTTTGGCTCCCCTGTCCTATACTTTCTGATTGGCTGAGATGGTCACAGTGTACAGGAATTCTCGAAGACAGCAGGTCTTCACTGCTCACCCTAAGCAGGAAGGGTGTCTGGTGGGCCCTTACCTTCTGGTCGCTTCTCCAGCACATCCTTCACCAAGTACCGCAGGGTACCCATTAAGACTGACTTTCAACTCAGTCTGGGCTCTGCTTCTGAGTGGCTGTCAGGGCATCCTAGAAGCAGGCTAAAGGACTAAGAGCAGCTGCTTCTTCCTCCCTAACAGAGCTCAGGCCCTGGAGCCTCCAGTGGACCTGGTGGAGACCACAGTGAGCT .................................................................................................................................................................................................................................................................((((........))))..(((.(((((((((.(((.((....)).)))..))))))))))))...(((..((((((....))).)))..)))......................................................... ................................................................................................................................................................................................................................................................257................................................................................................356................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................CAGTGTACAGGAATTCTCGAAGACAGC.................................................................................................................................................................................................................................................................. | 27 | 1 | 7.00 | 7.00 | 3.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TACTTTCTGATTGGCTGAGATGGTCAC............................................................................................................................................................................................................................................................................................ | 27 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGTACAGGAATTCTCGAAGACAGCAG................................................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................TCACAGTGTACAGGAATTCTCGAAGA...................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................CAGTGTACAGGAATTCTCGAAGACAGCA................................................................................................................................................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TACAGGAATTCTCGAAGACAGCAGGTCT............................................................................................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TCCAGTGGACCTGGTGGAGACCACAGT..... | 27 | 2 | 2.00 | 2.00 | 0.50 | - | - | - | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | 0.50 |
| ..............................................................................................................................TACAGGAATTCTCGAAGACAGCAGGTC............................................................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGTACAGGAATTCTCGAAGACAGCAGG............................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TATACTTTCTGATTGGCTGAGATGGTC.............................................................................................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TCCTATACTTTCTGATTGGCTGAGA................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................TAAAGGACTAAGAGCAGCTGCTTC................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGTACAGGAATTCTCGAAGACAGCAGGTC............................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................AGGCTAAAGGACTAAGga.......................................................................... | 18 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................GTGTACAGGAATTCTCGAAGACAGaag................................................................................................................................................................................................................................................................ | 27 | aag | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAGATGGTCACAGTGTACAGGAATTCT............................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................TACAGGAATTCTCGAAGACAGCAGGTttt........................................................................................................................................................................................................................................................... | 29 | ttt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ACAGTGTACAGGAATTCTCGAAGACAG................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................TGGACCTGGTGGAGACCACAGTGAGCaa | 28 | aa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................CTGTCAGGGCATCCTAGAAGCAG.......................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................AGTGGACCTGGTGGAGA............ | 17 | 2 | 1.00 | 1.00 | - | - | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TAGAAGCAGGCTAAAGGACTAAGAGCAa....................................................................... | 28 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TACTTTCTGATTGGCTGAGATGGTC.............................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TAGAAGCAGGCTAAAGGACTAAGAGC......................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TCCAGCACATCCTTCACCAAGTACCGC....................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................TCACAGTGTACAGGAATTCTCGAAGAC..................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................TAAGACTGACTTTCAACTCAGTCTGGGC................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................ACAGGAATTCTCGAAGACAGCAGGTCTT........................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................AAGACTGACTTTCAACTCAGTCTG................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................TAAAGGACTAAGAGCAGCTGCTTCTTCC............................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGTACAGGAATTCTCGAAGACAGCAGGTCT............................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................AGGCTAAAGGACTAAGAGCAGCT..................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TACTTTCTGATTGGCTGAGATGG................................................................................................................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................GAAGCAGGCTAAAGGACTta............................................................................. | 20 | ta | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................GTGGACCTGGTGGAGACCACAGTGAGC. | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACCTGGTGGAGACCACA....... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................TGGAGCCTCCAGTGGACC..................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TAGAAGCAGGCTAAAGGA................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ...............................................................................................................................................................................................................................................................................................................................AAAGGACTAAGAGCAG....................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................TGGACCTGGTGGAGACCACAGTGAG.. | 25 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................AGTGGACCTGGTGGAGACCA......... | 20 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................GGAGCCTCCAGTGGACCTGGTGGAGAC........... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................TGGACCTGGTGGAGACCACAGTGAGCT | 27 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................TGGACCTGGTGGAGA............ | 15 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - |
| TGATGCTGCCCAACTCCCCTGAGGCCCTGGGCCAGGCCACCCCTGGGACTGTAAGTCCTGTCCTGTTGCTCTCTCTGTTTGGCTCCCCTGTCCTATACTTTCTGATTGGCTGAGATGGTCACAGTGTACAGGAATTCTCGAAGACAGCAGGTCTTCACTGCTCACCCTAAGCAGGAAGGGTGTCTGGTGGGCCCTTACCTTCTGGTCGCTTCTCCAGCACATCCTTCACCAAGTACCGCAGGGTACCCATTAAGACTGACTTTCAACTCAGTCTGGGCTCTGCTTCTGAGTGGCTGTCAGGGCATCCTAGAAGCAGGCTAAAGGACTAAGAGCAGCTGCTTCTTCCTCCCTAACAGAGCTCAGGCCCTGGAGCCTCCAGTGGACCTGGTGGAGACCACAGTGAGCT .................................................................................................................................................................................................................................................................((((........))))..(((.(((((((((.(((.((....)).)))..))))))))))))...(((..((((((....))).)))..)))......................................................... ................................................................................................................................................................................................................................................................257................................................................................................356................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ..........................................................................................................................................................................................................................................................................................................................................AGCTGCTTCTTCCTCCctt......................................................... | 19 | ctt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |