| Gene: 1700016M24Rik | ID: uc007wcu.1_intron_19_0_chr15_74456831_r.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.ip |
(1) TDRD1.ip |
(14) TESTES |
| TGTTAGCTCTGTGTACCTGTGTATGCGGGGGTTTCTGTATGTTGTATGTGTGGGGTGGGTGTCTGTGCATGTGTTTGTGTGTGTGTGAGGTACACACCTTCCTGTTCCACTGATCAAGGGAGGGAGGCTGCTTGGGATGTGTGACAGGATTTTAGGGAAGTGTCCCCTGACTTGGCCTTTGGGTCATCTATGGGGGACAGGATGAGATCCTGAAGTCCAGCTTCCTCTCTGCGACCATCCTGCTCACCAG |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................TGCGGGGGTTTCTGTA................................................................................................................................................................................................................... | 16 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TCCACTGATCAAGGGAGGGA............................................................................................................................. | 20 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGACAGGATTTTAGGGAAGTGTCCCCTt................................................................................. | 28 | t | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTCCACTGATCAAGGGAGGGAGGCTGC....................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGACAGGATTTTAGGGAAGTGTCCCCT.................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGAGATCCTGAAGTCCAGCTTCCTCT...................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................CCTGTTCCACTGATCAAGGGAGGGAGGtt......................................................................................................................... | 29 | tt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GTGACAGGATTTTAGGGAAGTGTCCC.................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................TGTATGTTGTATGTGTGGGGTGGGTGTC........................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................TGCGGGGGTTTCTGTATGTTGTATGT......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TCCACTGATCAAGGGAGGGAGGCTta....................................................................................................................... | 26 | ta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TGTGACAGGATTTTAGGGAAGTGTCCCCTG................................................................................. | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TGTATGCGGGGGTTTCTGTATGTT............................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGAGATCCTGAAGTCCAGCTTCCTCTC..................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TGTGTGACAGGATTTTAGGGA............................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................................................................................................................GTCCAGCTTCCTCTCTGCGACCATC........... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TAGGGAAGTGTCCCCTGACTTGGCa......................................................................... | 25 | a | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................CAAGGGAGGGAGGCTtttg..................................................................................................................... | 19 | tttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................ATGCGGGGGTTTCTGTATGTTGTATG.......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TTGGGATGTGTGACAGGATTTTcggg............................................................................................. | 26 | cggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................CCACTGATCAAGGGAGGGAGGCTG........................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTCCACTGATCAAGGGAGGGAGGCTt........................................................................................................................ | 26 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTCCACTGATCAAGGGAGGGAGG........................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGAGATCCTGAAGTCCAGCTTCCTC....................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TGTGTGACAGGATTTTAGGGAAGTG........................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TAGGGAAGTGTCCCCTGACTTGGCat........................................................................ | 26 | at | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGACAGGATTTTAGGGAAGTGTCCCCTGA................................................................................ | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGACAGGATTTTAGGGAAGTGTCCCC................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TCCTGAAGTCCAGCTTCCTCTCTGCG................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGACAGGATTTTAGGGAAGTGTCCCCTa................................................................................. | 28 | a | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TAGCTCTGTGTACCTGTGTATGCGG.............................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGCTTGGGATGTGTGACAGGATTTTA................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................TAGGGAAGTGTCCCCTGACTTGG........................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................TGTGACAGGATTTTAGGGAAGTGTCCCCTGA................................................................................ | 31 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TCCACTGATCAAGGGAGGGAGGCTGC....................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGACAGGATTTTAGGGAAGTGTCC..................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTCCACTGATCAAGGGAGG............................................................................................................................... | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGACAGGATTTTAGGGAAGTGTCCCCTGAC............................................................................... | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GCTTCCTCTCTGCGACCATCCTG........ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| TGTTAGCTCTGTGTACCTGTGTATGCGGGGGTTTCTGTATGTTGTATGTGTGGGGTGGGTGTCTGTGCATGTGTTTGTGTGTGTGTGAGGTACACACCTTCCTGTTCCACTGATCAAGGGAGGGAGGCTGCTTGGGATGTGTGACAGGATTTTAGGGAAGTGTCCCCTGACTTGGCCTTTGGGTCATCTATGGGGGACAGGATGAGATCCTGAAGTCCAGCTTCCTCTCTGCGACCATCCTGCTCACCAG |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................TGAGGTACACACCTTCCTGTTCCACTGATCA...................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |