| Gene: Phf20l1 | ID: uc007waf.1_intron_2_0_chr15_66426541_f | SPECIES: mm9 |
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(1) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(12) TESTES |
| AGAGACCTGCACTAAGGAAAGAAGGGCTAAAGGATGAGGAAGAGCTCTTTGTAAGTAGGAATCTTTTCCCAGTTGTTCCTTTCATAAATAATGACATTTTAAAAGGATCCTGTCAAATTTAACAGCTTTTTTTGTTAATGAAATATTTATTATATTTGAAATTGATCTTAAAAGTTGTTTGAATAGGATTTTAAAGCTGGAGAAGAAGTACTGGCTCGTTGGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| .......................................................................................ATAATGACATTTTAAAAGGATCCTGTCAAATTTAACAGCTTTTTTTGTTAAT..................................................................................... | 52 | 1 | 58.00 | 58.00 | 58.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................AGAAGTACTGGCTCGTTGGA. | 20 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................GGAGAAGAAGTACTGGCTCGTTGGAC | 26 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - |
| ............................AAAGGATGAGGAAGAGCTCTTTGatt.......................................................................................................................................................................... | 26 | att | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TAAAGCTGGAGAAGAAGTACTGGCTC....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................................TGGAGAAGAAGTACTGGCTCGTTGGA. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................CTAAAGGATGAGGAAGAGCTCTTTG............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................AAGGGCTAAAGGATGAGGAAGA..................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................AATAGGATTTTAAAGCTGGAGAAGAAGT............... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................ATTTTAAAAGGATCCTata.............................................................................................................. | 19 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| AGAGACCTGCACTAAGGAAAGAAGGGCTAAAGGATGAGGAAGAGCTCTTTGTAAGTAGGAATCTTTTCCCAGTTGTTCCTTTCATAAATAATGACATTTTAAAAGGATCCTGTCAAATTTAACAGCTTTTTTTGTTAATGAAATATTTATTATATTTGAAATTGATCTTAAAAGTTGTTTGAATAGGATTTTAAAGCTGGAGAAGAAGTACTGGCTCGTTGGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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