| Gene: F930104E18Rik | ID: uc007waa.1_intron_2_0_chr15_65761868_r | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.mut |
(1) TDRD1.ip |
(11) TESTES |
| ACAGACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTCCCTCAGACAGGTGAGACTGCTTGGCCTGACCAAGAAACTGCATAGCTCAGAGGAAAGTGTAGCCTGGGGGAAGAGGAACAGTGGCGCAACAGCACCTGCAAGCATGCGTTCACTGTACATTATTACAGGGAAAGAATCAGAAGAATTGATTTCATGGCATTGCTGGACTGCAAAATTATAGCTAAAGCACTTCTTTCTCTTGGGCTATCACTCCTCTATGGATTTGTAAGAACCCTCACCTTGAAGGTGTTAGGACTGTTTGTGTATAATGGCTCAAGGGCATCTCATTTCAGTTTTGGAGAATGTTCCTCTTAATTTTTACAGATGGTATTCCTGCAGAGTGGCCATTCATCCCTGAGAAAGAGCCAGCCCGG ...........................................................................................................................................................((((......(((((((((((......(((.....)))......((((......)))).......((....))..))))))).)))).........(((.....)))..)))).....(((((((.....))))..)))........................................................................................................................ ........................................................................................................................................................153...............................................................................................................................................299................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ........................................................................................................................................................................................................................................................................................TTGAAGGTGTTAGGA....................................................................................................................... | 15 | 7 | 211.71 | 211.71 | 177.71 | 32.57 | - | - | - | - | 0.71 | 0.57 | 0.14 | - | - |
| .......................................................................................................................................................................................................................................................................................CTTGAAGGTGTTAGGA....................................................................................................................... | 16 | 4 | 1.75 | 1.75 | 0.50 | 1.25 | - | - | - | - | - | - | - | - | - |
| ..............................TCCTAGAGTCCCTCgctc.............................................................................................................................................................................................................................................................................................................................................................................. | 18 | gctc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................CCTTGAAGGTGTTAGGA....................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CATTATTACAGGGAAAGAATCAGAAG....................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................TTGAAGGTGTTAGGAtat.................................................................................................................... | 18 | tat | 0.14 | 211.71 | - | - | - | - | - | - | - | - | - | 0.14 | - |
| ........................................................................................................................................................................................................................................................................................TTGAAGGTGTTAGGAaa..................................................................................................................... | 17 | aa | 0.14 | 211.71 | - | - | - | - | - | - | - | - | - | - | 0.14 |
| ACAGACTACAAACCCAACCCAAGCACCAGCTCCTAGAGTCCCTCAGACAGGTGAGACTGCTTGGCCTGACCAAGAAACTGCATAGCTCAGAGGAAAGTGTAGCCTGGGGGAAGAGGAACAGTGGCGCAACAGCACCTGCAAGCATGCGTTCACTGTACATTATTACAGGGAAAGAATCAGAAGAATTGATTTCATGGCATTGCTGGACTGCAAAATTATAGCTAAAGCACTTCTTTCTCTTGGGCTATCACTCCTCTATGGATTTGTAAGAACCCTCACCTTGAAGGTGTTAGGACTGTTTGTGTATAATGGCTCAAGGGCATCTCATTTCAGTTTTGGAGAATGTTCCTCTTAATTTTTACAGATGGTATTCCTGCAGAGTGGCCATTCATCCCTGAGAAAGAGCCAGCCCGG ...........................................................................................................................................................((((......(((((((((((......(((.....)))......((((......)))).......((....))..))))))).)))).........(((.....)))..)))).....(((((((.....))))..)))........................................................................................................................ ........................................................................................................................................................153...............................................................................................................................................299................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ..................................................................................................................................................................................................................................................................................................................GGCTCAAGGGCATCttca.......................................................................................... | 18 | ttca | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................CTGCATAGCTCAGAGcccg.................................................................................................................................................................................................................................................................................................................................. | 19 | cccg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |