| Gene: C920006C10Rik | ID: uc007vzu.1_intron_5_0_chr15_65661439_f.5p | SPECIES: mm9 |
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(4) PIWI.ip |
(2) PIWI.mut |
(14) TESTES |
| ATTGTTCCATCCCTTTTGTTTAACATGCAGAAGATAGAAGAAGTTGACAGGTATTGTATACTAAAGTTGAGTCTGCAGAGATGGTTCAGAATTTAAAAGGGCATACTGTTCTTGCAGAAGATCAGAGTTCTCTTCTAGATACCTGATTTGGACAGCTTGGAGTTGCCTTAACTAAAGTTCTTAGTAGATCCATTGCTCCCCATGCACACCTGCATTCTCATGCACATACCCATACACACACACATGCACA .....................................................................................................................................(((((((.....))))))).(((.((((.((((...(((....)))....)))).))))..)))..................................................... ..................................................................................................................................131..................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
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| .......................................................................................................................................TAGATACCTGATTTGGACAGCTTGGA......................................................................................... | 26 | 1 | 11.00 | 11.00 | 6.00 | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TAACTAAAGTTCTTAGTAGATCCATTGC...................................................... | 28 | 1 | 4.00 | 4.00 | - | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................TTCAGAATTTAAAAGGGCATACTGTTC........................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TACTAAAGTTGAGTCTGCAGAGATGG...................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TTCTAGATACCTGATTTGGACAGCTT............................................................................................ | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TAAAGTTGAGTCTGCAGAGATGGT..................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TACTAAAGTTGAGTCTGCAGAGATGGTT.................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGAGTCTGCAGAGATGGTTCAGAATT............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................TAACATGCAGAAGATAGAAGAAGTTG............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................AACATGCAGAAGATAGAAGAAGT.............................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................................................................................................TTCTAGATACCTGATTTGGACAGC.............................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TAACATGCAGAAGATAGAAGAAGTTGACA......................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................TGCAGAAGATAGAAGAAGTTGACAGtcg..................................................................................................................................................................................................... | 28 | tcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................TACTAAAGTTGAGTCTGCAGAGATGGTTC................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TCTTCTAGATACCTGATTTGGACAGC.............................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TAGATACCTGATTTGGACA................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................TTTAAAAGGGCATACTGTTCTTGCAGAA................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................AACATGCAGAAGATAGAAGAAGTTGA........................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TAGTAGATCCATTGCTCCCCATGCAt........................................... | 26 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TTAACATGCAGAAGATAGAAGAAGTTGACA......................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................TTTAAAAGGGCATACTGTTCTTGCAGAAGATC............................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CAGAAGATAGAAGAAGTTGACAG........................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................TCTTAGTAGATCCATTGCTCCCCATGC............................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................AAGTTCTTAGTAGATCCATTGCTCCCCATG.............................................. | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................TGTTTAACATGCAGAAGATAGAAGAAGTT............................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................TCTTCTAGATACCTGATTTGGACAGCT............................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCAGAAGATAGAAGAAGTTGACAGaaag.................................................................................................................................................................................................... | 29 | aaag | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TAAAGTTCTTAGTAGATCCATTGCTCCCCA................................................ | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGCAGAAGATAGAAGAAGTTGACAGGT...................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TTCTAGATACCTGATTTGGACAGCTTGGA......................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................TAGATACCTGATTTGGACAGCTTGGAG........................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AACATGCAGAAGATAGAAGAAG............................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................TAGATACCTGATTTGGACAGCTTGG.......................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TACTAAAGTTGAGTCTGCAGAGATGGT..................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................ACATGCAGAAGATAGAAGAAGTTGACAG........................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................AACATGCAGAAGATAGAAGAAGTT............................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................TAACATGCAGAAGATAGAAGAAGTTGAC.......................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATTGTATACTAAAGTTGAGTCTGCA............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGCACACCTGCATTCTCATGCACATACCCA.................. | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ATTGTTCCATCCCTTTTGTTTAACATGCAGAAGATAGAAGAAGTTGACAGGTATTGTATACTAAAGTTGAGTCTGCAGAGATGGTTCAGAATTTAAAAGGGCATACTGTTCTTGCAGAAGATCAGAGTTCTCTTCTAGATACCTGATTTGGACAGCTTGGAGTTGCCTTAACTAAAGTTCTTAGTAGATCCATTGCTCCCCATGCACACCTGCATTCTCATGCACATACCCATACACACACACATGCACA .....................................................................................................................................(((((((.....))))))).(((.((((.((((...(((....)))....)))).))))..)))..................................................... ..................................................................................................................................131..................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
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