| Gene: Mtss1 | ID: uc007vtx.1_intron_1_0_chr15_58777080_r | SPECIES: mm9 |
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(4) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(21) TESTES |
| CTGAAGAGGCGCAGAGACCAAGGAGCATGACGGTGTCAGCTGCCACCAGGGTGATATACCTGTTCTCTGTATCTGCTTAGATTCACAGTTAGGCCAAAATGGGGGACCAAGGGACCCTGAGCAGCTGGAGGGGTGACTCTCCATCCTTCTTACCCAGCTCCACAATGTGTAAGACAGGAGGAGAACCCTCGTGTAGTAGTAAGGGACATAGAACTCTAGTTCCTGCATGAGAACTATGCAGGTCTAAGTAGCCACTACAGACACTGATGATGCTCACAGGACTGACCTGGGGTCCCACCTAAAGCTGTGGGTATGGTGGCTCTGGTCTCTTGAGTTTACATTCCCTGGTGTGTCTGTCCTCCATCCTGCAGCCTGGTGAGGAGATGGCGGCCTGTGAGGAACTGACACTCGCCCTGTCCCG ...............................................................................................................................................................................................................................................................................((....(((((.(((((((((.(((((........))))).(((..(((((.........)))))..))).))))))...))).))))).......)).................................................... ...............................................................................................................................................................................................................................................................................272................................................................................................371................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................................................GACACTGATGATGCTCACAGGACTGACC...................................................................................................................................... | 28 | 1 | 155.00 | 155.00 | 66.00 | 26.00 | 24.00 | 26.00 | 6.00 | - | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - |
| .....................................................................................................................................................................................................................................................................CACTGATGATGCTCACAGGACTGACC...................................................................................................................................... | 26 | 1 | 11.00 | 11.00 | 1.00 | 2.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................GACCAAGGGACCCTGAGCAGCTGGAGGG................................................................................................................................................................................................................................................................................................. | 28 | 1 | 8.00 | 8.00 | - | - | - | - | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................ACTGATGATGCTCACAGGACTGACC...................................................................................................................................... | 25 | 1 | 6.00 | 6.00 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................GACACTGATGATGCTCACAGGACTGAC....................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................ACCAAGGAGCATGACGGTGTCAGCTG........................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................ACCCTGAGCAGCTGGAG................................................................................................................................................................................................................................................................................................... | 17 | 3 | 1.67 | 1.67 | - | - | - | - | - | 1.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................GACACTGATGATGCTCACAGGACTGtcc...................................................................................................................................... | 28 | tcc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................CTGTTCTCTGTATCTGggga...................................................................................................................................................................................................................................................................................................................................................... | 20 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................ATGGCGGCCTGTGAGGAACTGAC............... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................ACTGATGATGCTCACAGGACTGACCTGGGG................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................ACTGATGATGCTCACAGGACTGACa...................................................................................................................................... | 25 | a | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................AATGTGTAAGACAGGAGGAGAACCCTCGT..................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........CAGAGACCAAGGAGCATGACGGTGTCA............................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................GACACTGATGATGCTCACAGGACTGAtc...................................................................................................................................... | 28 | tc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................AGGAGATGGCGGCCTGTGAGGAACTGA................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................GAGGAACTGACACTCGCCCTGTCC.. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................AGACACTGATGATGCTCACAGGACTGACC...................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............AGACCAAGGAGCATGACGGTG.................................................................................................................................................................................................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................GACGGTGTCAGCTGggga....................................................................................................................................................................................................................................................................................................................................................................................... | 18 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................................................................................................................................................................................ACTGATGATGCTCACAGGACTGAC....................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................GACACTGATGATGCTCACAGGACTGAac...................................................................................................................................... | 28 | ac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................TGTGTAAGACAGGAGGAGAACCC......................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| CTGAAGAGGCGCAGAGACCAAGGAGCATGACGGTGTCAGCTGCCACCAGGGTGATATACCTGTTCTCTGTATCTGCTTAGATTCACAGTTAGGCCAAAATGGGGGACCAAGGGACCCTGAGCAGCTGGAGGGGTGACTCTCCATCCTTCTTACCCAGCTCCACAATGTGTAAGACAGGAGGAGAACCCTCGTGTAGTAGTAAGGGACATAGAACTCTAGTTCCTGCATGAGAACTATGCAGGTCTAAGTAGCCACTACAGACACTGATGATGCTCACAGGACTGACCTGGGGTCCCACCTAAAGCTGTGGGTATGGTGGCTCTGGTCTCTTGAGTTTACATTCCCTGGTGTGTCTGTCCTCCATCCTGCAGCCTGGTGAGGAGATGGCGGCCTGTGAGGAACTGACACTCGCCCTGTCCCG ...............................................................................................................................................................................................................................................................................((....(((((.(((((((((.(((((........))))).(((..(((((.........)))))..))).))))))...))).))))).......)).................................................... ...............................................................................................................................................................................................................................................................................272................................................................................................371................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................TGACTCTCCATCCTTgga................................................................................................................................................................................................................................................................................. | 18 | gga | 2.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................ATGGTGGCTCTGGTCTCTTGAGTTTACA................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................GACTGACCTGGGGTCggg............................................................................................................................... | 18 | ggg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................CCCAGCTCCACAATgtac............................................................................................................................................................................................................................................................... | 18 | gtac | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGGACATAGAACTCTagg............................................................................................................................................................................................................ | 18 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................GACTGACCTGGGGTCggga............................................................................................................................... | 19 | ggga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................GACTGACCTGGGGTCCCgg............................................................................................................................. | 19 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................CTTACCCAGCTCCAC.................................................................................................................................................................................................................................................................. | 15 | 9 | 0.11 | 0.11 | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCTCCATCCTTCTTA............................................................................................................................................................................................................................................................................. | 15 | 18 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - |