| Gene: Nipbl | ID: uc007veq.1_intron_23_0_chr15_8277143_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(11) TESTES |
| CCGAGTGGCCGGCTGCTGAACTACTCCTTAGCTTGTTAGGGAGGCTGTTGGTAAGAGAATAGCATTTAAAGATTATTAATTACTACAAGACAACATAATGAGGATATACTCTGATTCACAGATGATGAATTCTTTAAAAATGTGTAAGAACATGAACATTGCATCTATTTTTGCATGTGTATAACTGTACATTATATCATCAGTACCTGTAGAAAGCAAAAATGTGAATTTTAGCACTTTGATTTCATTA ......................................................................................................((((((.((((.....))))...................(((((.........(((.((((........))))))).........))))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ..........................................................................................................TACTCTGATTCACAGATGATGAA......................................................................................................................... | 23 | 1 | 15.00 | 15.00 | 9.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | - | 1.00 | - | - |
| ..........................................................................................................TACTCTGATTCACAGATGATGAATTCTTT................................................................................................................... | 29 | 1 | 5.00 | 5.00 | - | 3.00 | - | 2.00 | - | - | - | - | - | - | - |
| .........................................................................................................ATACTCTGATTCACAGATGATGAA......................................................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TACTCTGATTCACAGATGATGAATTC...................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................CAGATGATGAATTCTcata................................................................................................................. | 19 | cata | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................TGTTAGGGAGGCTGTTtgg...................................................................................................................................................................................................... | 19 | tgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................TTTAAAGATTATTAAgccg....................................................................................................................................................................... | 19 | gccg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................TACTCTGATTCACAGATGATGAATT....................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................TACTCTGATTCACAGATGATGAAT........................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| CCGAGTGGCCGGCTGCTGAACTACTCCTTAGCTTGTTAGGGAGGCTGTTGGTAAGAGAATAGCATTTAAAGATTATTAATTACTACAAGACAACATAATGAGGATATACTCTGATTCACAGATGATGAATTCTTTAAAAATGTGTAAGAACATGAACATTGCATCTATTTTTGCATGTGTATAACTGTACATTATATCATCAGTACCTGTAGAAAGCAAAAATGTGAATTTTAGCACTTTGATTTCATTA ......................................................................................................((((((.((((.....))))...................(((((.........(((.((((........))))))).........))))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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