(3)
OTHER.mut
(1)
OVARY
(2)
PIWI.ip
(2)
PIWI.mut
(16)
TESTES

Sense strand
AGAGGGATTATTTGGTCAGCATAACCTAGAAAAATTATATTACAGTTTGATTATATGATCAAACTAAAAAGAAAAAAAGGCAGTTGCCTTTCACCTACTCAAAGAACAAAAAATCATCCTGACTGATCTGTGCACCCTGCACATTCCATACAAATGTCTTTCTAGAACTAAATACTGATTGTAAGGTTTATATATTACAGAATGAAACACCAAGAGGGCAGCCCTGACAGGATTCACCCCCAGGGATGCT
...................................................(((((((((...(((.(((((...((((((....)))))).....................................(((((.....))))).............))))).))).......(((.....))).)))).)))))........................................................
..................................................51...................................................................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT4()
Testes Data. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT2()
Testes Data. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
.....................................................TATGATCAAACTAAAAAGAAAAAAAGGC......................................................................................................................................................................... 28 1 6.00 6.00 - 4.00 - 2.00 - - - - - - - - - - - - -
.............................................................................................................................................................................ACTGATTGTAAGGTTTATATATTAC.................................................... 25 1 3.00 3.00 - - 3.00 - - - - - - - - - - - - - -
...................................................................................................................................................................................................TACAGAATGAAACACCAAGAGGGCAGC............................ 27 3 2.67 2.67 - 0.33 - - - 1.67 - - - 0.67 - - - - - - -
..........................................................................................................................................................................................................TGAAACACCAAGAGGGCAGCCCTGAC...................... 26 2 2.50 2.50 - 1.00 0.50 - - - 0.50 - 0.50 - - - - - - - -
................................................................................................................................................................TCTAGAACTAAATACTGATTGTAAGGTTT............................................................. 29 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - -
..................................................TTATATGATCAAACTAAAAAGAAAAAAAGGC......................................................................................................................................................................... 31 1 2.00 2.00 1.00 - - - - - - - - - - 1.00 - - - - -
................................................................................................................................................................................................................................TGACAGGATTCACCCCCAGGGA.... 22 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - -
.....................................................................................................AAGAACAAAAAATCATCCTGACTGATCTGT....................................................................................................................... 30 1 2.00 2.00 - 1.00 - - - - - - - - - - - - 1.00 - -
...............................................................................................................................................................TTCTAGAACTAAATACTGATTGTAAGGT............................................................... 28 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - -
................................................................TAAAAAGAAAAAAAGGCAGTTGCCTTTCACCT.......................................................................................................................................................... 32 1 2.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................................TATATTACAGAATGAAACACCAAGAGGGC............................... 29 3 2.00 2.00 - 0.33 - - - 1.33 - 0.33 - - - - - - - - -
................................................................................................................................................................................................TATTACAGAATGAAACACCAAGAGGGCAGC............................ 30 3 1.67 1.67 0.33 - - - 0.33 - - - - - - - 1.00 - - - -
................................................................................................................................................................TCTAGAACTAAATACTGATTGTAAGGTT.............................................................. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................TAGAACTAAATACTGATTGTAAGGTTTA............................................................ 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
........................................................GATCAAACTAAAAAGAAAAAAAGGCAGTT..................................................................................................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................CAAAAAATCATCCTGACTGATCTGTG...................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - -
....................................................................................................................TCCTGACTGATCTGTGCACCCTGCACAT.......................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - -
................................................................................................................................................................................................................................TGACAGGATTCACCCCCAGGGATGC. 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - -
.......................................................TGATCAAACTAAAAAGAAAAAAAGGCAGTT..................................................................................................................................................................... 30 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - -
.....................................................................................................................................................................AACTAAATACTGATTGTAAGGTTTATA.......................................................... 27 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - -
...............................................................................................................................................................TTCTAGAACTAAATACTGATTGTAAGGTT.............................................................. 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - -
........................................................................................................................................................................TAAATACTGATTGTAAGGTTTATATATT...................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
...............TCAGCATAACCTAGAAAAATTATATTAtagt............................................................................................................................................................................................................ 31 tagt 1.00 0.00 1.00 - - - - - - - - - - - - - - - -
................................................................TAAAAAGAAAAAAAGGCAGTTGCCTTTCAC............................................................................................................................................................ 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
.....................................................TATGATCAAACTAAAAAGAAAAAAAGGa......................................................................................................................................................................... 28 a 1.00 0.00 - - - 1.00 - - - - - - - - - - - - -
.........................................................................................................................................TGCACATTCCATACAAATGTCTTTCTAGA.................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
...............................................................................................TACTCAAAGAACAAAAAATCATCCTGACTG............................................................................................................................. 30 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - -
.............................................................................................................AAAATCATCCTGACTGATCTGTGCACCCT................................................................................................................ 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
...........................................................................................CACCTACTCAAAGAACAAAAAATCATCCT.................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - -
................................................................................................................................................................................................................................TGACAGGATTCACCCCCAGGGAT... 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................AATGTCTTTCTAGAACTAAATACTGATT...................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................TTATATATTACAGAATGAAACACCAAGAG.................................. 29 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - -
................................................................................................................................................................................................................................TGACAGGATTCACCCCCAGGGATGCT 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - -
..................................................TTATATGATCAAACTAAAAAGAAAAAAAGtg......................................................................................................................................................................... 31 tg 1.00 0.00 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................CAGGATTCACCCCCAGGGATG.. 21 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - -
.......................................................................................................................TGACTGATCTGTGCACCCTGCACATTC........................................................................................................ 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - -
..................................................................................................TCAAAGAACAAAAAATCATCCTGACTGAT........................................................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
..................................................................................................................................................................TAGAACTAAATACTGATTGTAAGGTT.............................................................. 26 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - -
.............................................................................................CCTACTCAAAGAACAAAAAATCATCCTG................................................................................................................................. 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................AACTAAATACTGATTGTAAGGTT.............................................................. 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
...................................................................................................CAAAGAACAAAAAATCATCCTGACTGATC.......................................................................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................TGACAGGATTCACCCCCAGGGATGCcaag 29 caag 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
...................................................TATATGATCAAACTAAAAAGAAAAAAAGGC......................................................................................................................................................................... 30 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - -
..........................................................................................................................................................................................................TGAAACACCAAGAGGGCA.............................. 18 4 0.75 0.75 - - - - - 0.75 - - - - - - - - - - -
................................................................................................................................................................................................TATTACAGAATGAAACACCAAGAGGGCAG............................. 29 3 0.67 0.67 - - 0.33 - 0.33 - - - - - - - - - - - -
..............................................................................................................................................................................................TATATTACAGAATGAAACACCAAGAGG................................. 27 3 0.67 0.67 - - - - - - - - - - - - 0.67 - - - -
...........................................................................................................................................................................................................GAAACACCAAGAGGGCAGCCCTGACA..................... 26 2 0.50 0.50 - - - - - - - - 0.50 - - - - - - - -
..........................................................................................................................................................................................................TGAAACACCAAGAGGGCAGCCCTGACA..................... 27 2 0.50 0.50 - - - - - - - - - - 0.50 - - - - - -
...................................................................................................................................................................................................TACAGAATGAAACACCAAGAGGGCAGCCC.......................... 29 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - -
....................................................................................................................................................................................................ACAGAATGAAACACCAAGAGGGCAGCCCTG........................ 30 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - -
...................................................................................................................................................................................................TACAGAATGAAACACCAAGAGGGCAGCCCTGA....................... 32 2 0.50 0.50 - - - - - - - 0.50 - - - - - - - - -
...................................................................................................................................................................................................TACAGAATGAAACACCAAGAGGGCAG............................. 26 3 0.33 0.33 - - - - - - - 0.33 - - - - - - - - -
.............................................................................................................................................................................................ATATATTACAGAATGAAACACCAAGAGGGC............................... 30 3 0.33 0.33 0.33 - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................TTACAGAATGAAACACCAAGAGGGCAGC............................ 28 3 0.33 0.33 - 0.33 - - - - - - - - - - - - - - -
..................................................................................................................................................................................................TTACAGAATGAAACACCAAGAGGGCAG............................. 27 3 0.33 0.33 - - - - - - - - - - - 0.33 - - - - -
................................................................................................................................................................................................TATTACAGAATGAAACACCAAGAGGGC............................... 27 3 0.33 0.33 - - - - - - - - 0.33 - - - - - - - -
............................................................................................................................................................................................TATATATTACAGAATGAAACAC........................................ 22 3 0.33 0.33 0.33 - - - - - - - - - - - - - - - -
................................................................................................................................................................................................TATTACAGAATGAAACACCAAGAGGGCAGa............................ 30 a 0.33 0.67 - - - 0.33 - - - - - - - - - - - - -
................................................................................................................................................................................................TATTACAGAATGAAACACCAAGAGGGCA.............................. 28 3 0.33 0.33 - - - - - - - 0.33 - - - - - - - - -

Antisense strand
AGAGGGATTATTTGGTCAGCATAACCTAGAAAAATTATATTACAGTTTGATTATATGATCAAACTAAAAAGAAAAAAAGGCAGTTGCCTTTCACCTACTCAAAGAACAAAAAATCATCCTGACTGATCTGTGCACCCTGCACATTCCATACAAATGTCTTTCTAGAACTAAATACTGATTGTAAGGTTTATATATTACAGAATGAAACACCAAGAGGGCAGCCCTGACAGGATTCACCCCCAGGGATGCT
...................................................(((((((((...(((.(((((...((((((....)))))).....................................(((((.....))))).............))))).))).......(((.....))).)))).)))))........................................................
..................................................51...................................................................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesWT4()
Testes Data. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT2()
Testes Data. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
.....................................................................................GCCTTTCACCTACTCAAAGAACAAAAAA......................................................................................................................................... 28 1 2.00 2.00 1.00 - - - - - - - - 1.00 - - - - - - -
..........................................................................................TCACCTACTCAAAGAACAAAAAATCA...................................................................................................................................... 26 1 2.00 2.00 - - - 1.00 - - 1.00 - - - - - - - - - -
...............................................................................GCAGTTGCCTTTCACCTACTCAAAGAACA.............................................................................................................................................. 29 1 2.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - -
............................................................................................................................GATCTGTGCACCCTGCACATTCCATACAA................................................................................................. 29 4 1.00 1.00 0.50 - - 0.50 - - - - - - - - - - - - -
............................................................................................................................CTGTGCACCCTGCACATTCCATAgtc.................................................................................................... 26 gtc 1.00 0.00 - - - - - - 1.00 - - - - - - - - - -
..........................................................................................................................................CACATTCCATACAAATGTCTTTCTAg...................................................................................... 26 g 1.00 0.00 - - - - - - 1.00 - - - - - - - - - -
....................................................................................CCTTTCACCTACTCAAAGAACAAAaa............................................................................................................................................ 26 aa 1.00 0.00 - 1.00 - - - - - - - - - - - - - - -
................................................................................................ACTCAAAGAACAAAAAATCATCCTGACTGA............................................................................................................................ 30 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - -
......................................................................GAAAAAAAGGCAGTTGCCTTTCACCTACTCA..................................................................................................................................................... 31 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
.............................................................................AGGCAGTTGCCTTTCACCTACTCAAAGA................................................................................................................................................. 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................CTTTCTAGAACTAAgggc............................................................................... 18 gggc 1.00 0.00 - - - - - - - - - - - - - - - - 1.00
............................................................................................ACCTACTCAAAGAACAAAAAATCATCC................................................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - -
............................................................................................................................................................................TACTGATTGTAAGGTTTATATATTACAGAA................................................ 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
....................................................................................TGCCTTTCACCTACTCAAAGAACAAAA........................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................TCTAGAACTAAATACTGATTGTAAGca................................................................. 27 ca 1.00 0.00 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................CATTCCATACAAATGTCTTTCTA...................................................................................... 23 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - -
..........................................................................AAAGGCAGTTGCCTTTCACCTACTCAAAGAAa................................................................................................................................................ 32 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - -
.......................................................................................................................................CCTGCACATTCCATACAAATGTCTTTCTA...................................................................................... 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - -
...................................................................................................................ATCCTGACTGATCTGTGCACCCTGCACA........................................................................................................... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - -
............................................................................................................................CTGTGCACCCTGCACATTCCATActc.................................................................................................... 26 ctc 1.00 0.00 - - - 1.00 - - - - - - - - - - - - -
.........................................................................AAAAGGCAGTTGCCTTTCACCTACTCAAAc................................................................................................................................................... 30 c 1.00 0.00 1.00 - - - - - - - - - - - - - - - -
.................................................................................AGTTGCCTTTCACCTACTCAAAGAACAA............................................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 -
...............................................................................................................................................TTCCATACAAATGTCTTTCTAGAACTA................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................TCCTGACTGATCTGTGCACCCTGCACA........................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - -
..........................................................................................................................................GCACATTCCATACAAATGTCTTTCTAGAA................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
...........................................................................AAAGGCAGTTGCCTTTCACCTACTCAAAGA................................................................................................................................................. 30 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - -
..............GTCAGCATAACCTAGAAAAATTATATTA................................................................................................................................................................................................................ 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................GTGCACCCTGCACATTCCATACAAcgat................................................................................................. 28 cgat 1.00 0.00 1.00 - - - - - - - - - - - - - - - -
......................................................................GAAAAAAAGGCAGTTGCCTTTCACCTACTC...................................................................................................................................................... 30 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - -
.........................................................................................................................................................ATGTCTTTCTAGAACTAAATACTGATTGTA................................................................... 30 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - -
...............................................................................................................................................TTCCATACAAATGTCTTTCTAGAACTAAA.............................................................................. 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - -
.................................................................................AGTTGCCTTTCACCTACTCA..................................................................................................................................................... 20 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - -
............................................................................................................................GATCTGTGCACCCTGCACATTCCATA.................................................................................................... 26 5 0.40 0.40 - - - - 0.40 - - - - - - - - - - - -
..................................TTATATTACAGTTTGATTATATGATCAAA........................................................................................................................................................................................... 29 3 0.33 0.33 0.33 - - - - - - - - - - - - - - - -
..........................................................................................................................CTGATCTGTGCACCCTGCACATTCCA...................................................................................................... 26 3 0.33 0.33 - - - - 0.33 - - - - - - - - - - - -
...................................................................................................................................GCACCCTGCACATTCCATACAAATGTC............................................................................................ 27 4 0.25 0.25 0.25 - - - - - - - - - - - - - - - -
...................................................................................................................................GCACCCTGCACATTCCATACAAATGTCTT.......................................................................................... 29 4 0.25 0.25 - - - 0.25 - - - - - - - - - - - - -
...............................................................................................................................CTGTGCACCCTGCACATTCCATACAAA................................................................................................ 27 4 0.25 0.25 - - - 0.25 - - - - - - - - - - - - -
............................................................................................................................ATCTGTGCACCCTGCACATTCCATACAAa................................................................................................. 29 a 0.25 0.00 0.25 - - - - - - - - - - - - - - - -
.............................................................................................................................ATCTGTGCACCCTGCACATTCCATACAA................................................................................................. 28 4 0.25 0.25 - - - 0.25 - - - - - - - - - - - - -
...........................................................................................................................ATCTGTGCACCCTGCACATTCCATACAAtt................................................................................................. 30 tt 0.25 0.00 - - - - 0.25 - - - - - - - - - - - -