| Gene: Phr1 | ID: uc007uwk.1_intron_4_0_chr14_103521840_r.3p | SPECIES: mm9 |
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(1) PIWI.ip |
(1) PIWI.mut |
(6) TESTES |
| CAATACATGACTAGAAAAAATTAGAGTTGAAAACCTAGTCAATAATGATTGTCTCTTAAAAGCCCTGGCATGCCTTGGTTTAAAGTGCTTGGTTTTTCTCGTCCCCACGTCATGTAGCTCTCCTACATTGGAGTCTCCCCATTCCTTCAGTGTGGCCATGGCTGCATTCGCTCACTCTCGTCCGTGTTTCTCTCTTTCAGTTGGACTGCAGTCATGTGTTCCACTTACAGTGCTGTCGGCGAGTTTTGGA .........................................................(((((((..(((((((....)).....))))).)))))))..............((((((.....)))))).(((((......)))))......................................................................................................... ...........................................44......................................................................................................148.................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
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| ................................................TTGTCTCTTAAAAGCCCTGGCATGCCTTGGTTTAAAGTGCTTGGTTTTTCTC...................................................................................................................................................... | 52 | 1 | 143.00 | 143.00 | 143.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................................GCTGTCGGCGAGTcggg.. | 17 | cggg | 1.00 | 0.00 | - | 1.00 | - | - | - | - |
| ..............................................................................................................................ATTGGAGTCTCCCCgccc.......................................................................................................... | 18 | gccc | 1.00 | 0.00 | - | - | - | - | - | 1.00 |
| .............................................................................................................................................................................................................................CACTTACAGTGCTGTCGGCGAGTTTTG.. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - |
| .....................................................................................................................................................................................................................................GTGCTGTCGGCGAGTTT.... | 17 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................................................AGTCATGTGTTCCACTTACAGTGCTGTCGGa.......... | 31 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................................................TTCAGTTGGACTGCAGTCATGTGTTC............................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - |
| CAATACATGACTAGAAAAAATTAGAGTTGAAAACCTAGTCAATAATGATTGTCTCTTAAAAGCCCTGGCATGCCTTGGTTTAAAGTGCTTGGTTTTTCTCGTCCCCACGTCATGTAGCTCTCCTACATTGGAGTCTCCCCATTCCTTCAGTGTGGCCATGGCTGCATTCGCTCACTCTCGTCCGTGTTTCTCTCTTTCAGTTGGACTGCAGTCATGTGTTCCACTTACAGTGCTGTCGGCGAGTTTTGGA .........................................................(((((((..(((((((....)).....))))).)))))))..............((((((.....)))))).(((((......)))))......................................................................................................... ...........................................44......................................................................................................148.................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
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