(1)
OTHER.ip
(6)
OTHER.mut
(6)
PIWI.ip
(2)
PIWI.mut
(29)
TESTES

Sense strand
GTCGCCGCGGGAGGAGGGGGTTGAGCTGGCTCCGGAGTTGGCCAAAGAAGGTGGGCATTTCTCGCTTCTCCTCGCCTCCCCCGCCCCCTCCTGGGCTCCCCTCCCTCCCGCCCCGCACCCCACGTGAAGCGGAATATAAAGGGGGGTGTGTGACTGGAGGGGGAAGTGAATGGCGAAGGACTGAAGGGGTCCCCCTTCGGTTCCCCAGCCACCTGGTTCACCCGGTTCATCCTCCCTTCCCGAAGTTAGCCCTCGAAGGCACGAGCAGCCGGCGCCTTCGGCAGAGGAGGAGGAGGAGG
........................................................................................................................(((......(((.(((((........)))))..))).........))).........(((((.....)))))...........................................................................................................
.......................................................................................................................120.....................................................................192.........................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
............................................................................................................................TGAAGCGGAATATAAAGGGGGGTGT...................................................................................................................................................... 25 1 9.00 9.00 4.00 - - 1.00 2.00 - - - - - 1.00 - - - - - 1.00 - - - - - - - - - - - -
...............GGGGGTTGAGCTGGCTCCGG........................................................................................................................................................................................................................................................................ 20 1 6.00 6.00 - - - - - - - 6.00 - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................TAGCCCTCGAAGGCACGAGCAGCCGGCG......................... 28 1 5.00 5.00 3.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................TCCCGAAGTTAGCCCTCGAAGGCACGA................................... 27 1 4.00 4.00 - 2.00 - - - - - - - - - - - 1.00 - - - - - - - 1.00 - - - - - - -
............................................................................................................................TGAAGCGGAATATAAAGGGGGGTGTG..................................................................................................................................................... 26 1 3.00 3.00 1.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................TAGCCCTCGAAGGCACGAGCAGCCGGCGC........................ 29 1 3.00 3.00 1.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................TCCCGAAGTTAGCCCTCGAAGGCACGAGC................................. 29 1 3.00 3.00 - 1.00 - - - - - - - 1.00 - - - - - - - 1.00 - - - - - - - - - - -
............................................................................................................................TGAAGCGGAATATAAAGGGGGGTGTt..................................................................................................................................................... 26 t 3.00 9.00 1.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................GAAGTGAATGGCGAAGGACTGAAGGG............................................................................................................... 26 1 3.00 3.00 - - - - - - - - - - 2.00 - - - - - - - - 1.00 - - - - - - - - -
.......................................................................................................................................................GACTGGAGGGGGAAGTGAATGGC............................................................................................................................. 23 1 3.00 3.00 - - - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................AGCAGCCGGCGCCTTCGGCAGAGGA........... 25 1 2.00 2.00 - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................TCCCGAAGTTAGCCCTCGAAGGCACGAG.................................. 28 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................TGAAGCGGAATATAAAGGGGGGTG....................................................................................................................................................... 24 1 2.00 2.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................TTCGGCAGAGGAGGAGGAGGAGGagt 26 agt 2.00 0.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................ATGGCGAAGGACTGAAG................................................................................................................. 17 1 2.00 2.00 - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
..............................TCCGGAGTTGGCCAAAGAAGGTGGGC................................................................................................................................................................................................................................................... 26 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................CTGGCTCCGGAGTTGGCCAAAGAAGGT....................................................................................................................................................................................................................................................... 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................AATGGCGAAGGACTGAAGGGG.............................................................................................................. 21 1 2.00 2.00 - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................GGCACGAGCAGCCGGCGCCTTCGGCAG............... 27 1 2.00 2.00 - - - - - - - - - - - - - 1.00 1.00 - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................CGAAGTTAGCCCTCGAAGGCACGA................................... 24 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................GTGTGTGACTGGAGGGGGAAGT.................................................................................................................................... 22 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................CAAAGAAGGTGGGCATTTCTCGCTTC....................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...............................................................................................................................AGCGGAATATAAAGGGGGGTGTGTGt.................................................................................................................................................. 26 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................TGGCCAAAGAAGGTGGGCATTTCTCGCT......................................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................AATATAAAGGGGGGgacc..................................................................................................................................................... 18 gacc 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.........................................................TTTCTCGCTTCTCCTCGCCTCCCCCGC....................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................TTAGCCCTCGAAGGCACGAGCAGCCGGC.......................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
....................................................................................................................................................TGTGACTGGAGGGGGAAGTGAATGGCcaa.......................................................................................................................... 29 caa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................GAATGGCGAAGGACTGAAGG................................................................................................................ 20 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
........................................................................................................................CACGTGAAGCGGAATATAAAGGGG........................................................................................................................................................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................CACGTGAAGCGGAATATAAAGGGGGGT........................................................................................................................................................ 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................CGTGAAGCGGAATATAAAGGGGGGT........................................................................................................................................................ 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................CCGGAGTTGGCCAAAGAAGGTGGGCATT................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TCGGCAGAGGAGGAGGAGGAGGagga 26 agga 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TCGGCAGAGGAGGAGGAGGAGGaaa 25 aaa 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................TCCCGAAGTTAGCCCTCGAAGGCACGAGCA................................ 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................GAATATAAAGGGGGGTGTGTGACTG............................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................AGCGGAATATAAAGGGGGGTGTGTGACT................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..................................................................................................................................................................GAAGTGAATGGCGAAGGACT..................................................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................CTTCGGCAGAGGAGGAGGAGGAG. 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................GCGGAATATAAAGGGGGGTGTGTGAC................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................CCGAAGTTAGCgggt............................................. 15 gggt 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
........................................................................................................................................................................AATGGCGAAGGACTGAAGGtt.............................................................................................................. 21 tt 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................GGAAGTGAATGGCGAAGGACTGAAGG................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................CTTCTCCTCGCCTCCagg......................................................................................................................................................................................................................... 18 agg 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................CGTGAAGCGGAATATAAAGGGGGGTG....................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................AAGCGGAATATAAAGGGGGGTGTGT.................................................................................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................TTCACCCGGTTCATCCTCCCTTCtcg......................................................... 26 tcg 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................ACGTGAAGCGGAATATAAAGGG............................................................................................................................................................ 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...................................................................................................................................................................AAGTGAATGGCGAAGGACTGAAGGGG.............................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.....................................................GGCATTTCTCGCTTCTCCTC.................................................................................................................................................................................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...................................................................................................................................GAATATAAAGGGGGGTGTGTGACT................................................................................................................................................ 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................GAAGTTAGCCCTCGAAGGCACGAGCAGCC............................. 29 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................TCGGCAGAGGAGGAGGAGGAGGagat 26 agat 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................TCCTCCCTTCCCGAAGTTAGCCCTCGAA.......................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
....................................................................................................................................................TGTGACTGGAGGGGGAAGTGAATG............................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................GAAGTGAATGGCGAAGGACTGAAGGGG.............................................................................................................. 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................GTGACTGGAGGGGGAAGTGAATGGC............................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...............................CCGGAGTTGGCCAAAGAAGGTGGGC................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
..........................................................................................................................................................................TGGCGAAGGACTGAAGGGGTCC........................................................................................................... 22 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................GGGTGTGTGACTGGAG............................................................................................................................................ 16 7 0.14 0.14 - - - - - - - - - - - - - - - - - - - 0.14 - - - - - - - - -

Antisense strand
GTCGCCGCGGGAGGAGGGGGTTGAGCTGGCTCCGGAGTTGGCCAAAGAAGGTGGGCATTTCTCGCTTCTCCTCGCCTCCCCCGCCCCCTCCTGGGCTCCCCTCCCTCCCGCCCCGCACCCCACGTGAAGCGGAATATAAAGGGGGGTGTGTGACTGGAGGGGGAAGTGAATGGCGAAGGACTGAAGGGGTCCCCCTTCGGTTCCCCAGCCACCTGGTTCACCCGGTTCATCCTCCCTTCCCGAAGTTAGCCCTCGAAGGCACGAGCAGCCGGCGCCTTCGGCAGAGGAGGAGGAGGAGG
........................................................................................................................(((......(((.(((((........)))))..))).........))).........(((((.....)))))...........................................................................................................
.......................................................................................................................120.....................................................................192.........................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesWT1()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
.................................................................................................................................................................................................................................TTCATCCTCCCTTCCCGAA....................................................... 19 1 6.00 6.00 - - - - - - 6.00 - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................CCGGTTCATCCTCCCTT............................................................. 17 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.........................................................................................................CCGCCCCGCACCCCACac................................................................................................................................................................................ 18 ac 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.........................................................................................................................................................................................................................................CCCTTCCCGAAGTTAGCCCT.............................................. 20 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................AGGGGTCCCCCTTCGGTTCCCCAGCCACCTGGTTCA............................................................................... 36 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
.......................................................................................................................................................................................................................................CTCCCTTCCCGAAGTTAGCCCTCGAAGG........................................ 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................CATCCTCCCTTCCCGAAGTTAGCC................................................ 24 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................TTCCCGAAGTTAagg................................................... 15 agg 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................GCTGGCTCCGGAGTTGag................................................................................................................................................................................................................................................................... 18 ag 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.................................................................................................................................................................................................................................TTCATCCTCCCTTCCCGA........................................................ 18 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................CCCGGTTCATCCTCCC............................................................... 16 2 0.50 0.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - -