| Gene: Neil2 | ID: uc007uhl.1_intron_1_0_chr14_63801891_r | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(2) PIWI.mut |
(16) TESTES |
| GGATCACGTGGTGGAGTTCAGTAAGGACTGGCTTCGGGACAAATTCCAAGGCAAGGAACGGCACACACAGATCTACCAGAAGGAACAATGTCCTTCTGGTCACCAGGTCATGAAGGAGACATTTGGGCCCCCAGATGGGCTCCAGAGGCTCACCTGGTGGTGCCCTCAATGCCAGCCCCAGCTGTCCTCCAAGGGGCCCCAGAATCTCCCGTCCTCCTAAAACATGTGGCCTTTGCCGTGGGGCTTGTAGCCTTGGAGATCCAGGTGCTGTGTGTCCTGAAAGAAGGGTGTAGGCAGGGATAGCATTACAGATCAGGGTAAGGAAGTTCAGGAGAGTCAGTATTGCTGACATTCATCCGTAGGATTATGCCTCAACTGCAGCTTTCATAGTGGTTGATAGGTGCTTTCCTTTTCTAGTTAATTCTATGTAATCCCACCATGCTGTCAAAACCCTGACAGTGGACTGG ................................................................................................................................................................................................................................................................................................................................(((((.....((((((((((.....)))))..)).)))..((((...((((((((((((..........))))))))..))))...))))))))).................................................... .............................................................................................................................................................................................................................................................................................................................318................................................................................................417................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................GGAACGGCACACACAGATCTACCAGAAG................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TTCCAAGGCAAGGAACGGCACACACAG............................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TCGGGACAAATTCCAAGGCAAGGAACGGC..................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTTTCATAGTGGTTGATAGGTG................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................TCAGGGTAAGGAAGTTCAGGAGAGTC................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................TGCCTCAACTGCAGCTTTCATAGTGGTT........................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................CCTGAAAGAAGGGTGTAGGCAGGGA....................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................TTACAGATCAGGGTAAGGAAGTTCAG........................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................AGCATTACAGATCAGGGTAAGGAAGTT........................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................TGTGTGTCCTGAAAGAAGGGTGTAGGC............................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGGAACGGCACACACAGATCTACCAGAAG................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TAAAACATGTGGCCTTTGCCGTGGGGC............................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................AAAGAAGGGTGTAGGCAGGGATAGCA.................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................TTATGCCTCAACTGCAGCTTTCATAG............................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................TTACAGATCAGGGTAAGGAAGTTCAGG....................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................TGAAAGAAGGGTGTAGGCAGGGATA..................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................AGGTGCTGTGTGTCCTGAAAGAAG..................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................AACATGTGGCCTTTGCCGTGGGGCTT............................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................................................................................................................................................................GGTGCTGTGTGTCCTGAAAGAAGGGTG................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TCCAAGGCAAGGAACGGCACACACAGA............................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................TTACAGATCAGGGTAAGGAAGTTCAGGA...................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAAGGAGACATTTGGGCCCCCAGAT........................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................TGTGTGTCCTGAAAGAAGG.................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................................................................................................................................................................................................................GTATTGCTGACATTCATCCGTAGGATT..................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................AATTCCAAGGCAAGGAACGGCACACACA.............................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................TTGCTGACATTCATCCGTAGGATTAT................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................AAGAAGGGTGTAGGCAGGGATAGCA.................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TAAGGACTGGCTTCGGGACAAATTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................GGATTATGCCTCAACTGCAGCT.................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................................................................................................................................................................................GAAAGAAGGGTGTAGGCAGGGATAGCAT................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TCTACCAGAAGGAACA............................................................................................................................................................................................................................................................................................................................................................................................ | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - |
| GGATCACGTGGTGGAGTTCAGTAAGGACTGGCTTCGGGACAAATTCCAAGGCAAGGAACGGCACACACAGATCTACCAGAAGGAACAATGTCCTTCTGGTCACCAGGTCATGAAGGAGACATTTGGGCCCCCAGATGGGCTCCAGAGGCTCACCTGGTGGTGCCCTCAATGCCAGCCCCAGCTGTCCTCCAAGGGGCCCCAGAATCTCCCGTCCTCCTAAAACATGTGGCCTTTGCCGTGGGGCTTGTAGCCTTGGAGATCCAGGTGCTGTGTGTCCTGAAAGAAGGGTGTAGGCAGGGATAGCATTACAGATCAGGGTAAGGAAGTTCAGGAGAGTCAGTATTGCTGACATTCATCCGTAGGATTATGCCTCAACTGCAGCTTTCATAGTGGTTGATAGGTGCTTTCCTTTTCTAGTTAATTCTATGTAATCCCACCATGCTGTCAAAACCCTGACAGTGGACTGG ................................................................................................................................................................................................................................................................................................................................(((((.....((((((((((.....)))))..)).)))..((((...((((((((((((..........))))))))..))))...))))))))).................................................... .............................................................................................................................................................................................................................................................................................................................318................................................................................................417................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGTAATCCCACCATGCTGTCA.................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................CCTGGTGGTGCCCTagcg............................................................................................................................................................................................................................................................................................................. | 18 | agcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................GCCCCAGAATCTCCCGTCCTCCTA........................................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................CCAGAGGCTCACCTGttt....................................................................................................................................................................................................................................................................................................................... | 18 | ttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |