| Gene: Cab39l | ID: uc007uek.1_intron_0_0_chr14_60059860_f.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(14) TESTES |
| AGTGAGGCACTTCGCTGGAGTGGTGGCGCAGCGCTCTCTGCCCGCGGTAGGTGTGTGGCTGCGGCGAGCCTTTTCCGGCTCTGGGAGTGTGTGTGTGGAAGGAGAGTCCTCGGGGTGACAGGAGTGTTGGGAGTGAAGGGGCGACTTAACTAGCAGGGGATTCTTCTCGCCCGCCCGGAGTCTCCTCCCTGTGTTTGGGAGGCAGGCGTGGTGGTGGTGGCGGTGGCGGTGGCCCCGGCTTGGCTTTGCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................TCCGGCTCTGGGAGTGTG............................................................................................................................................................... | 18 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TGGGAGGCAGGCGTGGTGGTGGTGGC............................. | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TAGGTGTGTGGCTGCGGC......................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ............................................CGGTAGGTGTGTGGCTGCGGC......................................................................................................................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................CGGCTCTGGGAGTGTGTG............................................................................................................................................................. | 18 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................GCGGTAGGTGTGTGGCTGCG........................................................................................................................................................................................... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - |
| ..................................................................................................AAGGAGAGTCCTCGGGG....................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................CGCGGTAGGTGTGTGGCTGCGGC......................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GTGGCTGCGGCGAGCCTT.................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................CGCTCTCTGCCCGCGGTAGGTG..................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................CGGCTCTGGGAGTGTGTGTGTGGAAG..................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................CTTTTCCGGCTCTGGGAGTGTGTG............................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................GCTCTGGGAGTGTGTGTGTGGA....................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................GCGGTAGGTGTGTGGCTG............................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................CGAGCCTTTTCCGGCTCTGGGAGTGTGTGT............................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TAGGTGTGTGGCTGCGG.......................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........ACTTCGCTGGAGTGGTGGCG.............................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................CTGCCCGCGGTAGGTGTGTGGCTGC............................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................TCCGGCTCTGGGAGTGTGTGTG........................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TGGCGCAGCGCTCTCTGCC................................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................GCGCTCTCTGCCCGCGGTAGGTGT.................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................GGAGTGGTGGCGCAGCGCTCT..................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................CGGTAGGTGTGTGGCTGC............................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................GCCCGCGGTAGGTGTGTG................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................CCGGCTCTGGGAGTGTG............................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................GCGGTAGGTGTGTGGCTGCGGCGAG...................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................GTGACAGGAGTGTTGGGA...................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TCCGGCTCTGGGAGTGTGT.............................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTGTGTGGCTGCGGC......................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTGTGTGGCTGCGG.......................................................................................................................................................................................... | 16 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................................AGTGTGTGTGTGGAAGGAGA................................................................................................................................................. | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| .....................................................................................AGTGTGTGTGTGGAAGGA................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ..................................................................................GGGAGTGTGTGTGTGGAA...................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ..................................................GTGTGTGGCTGCGGC......................................................................................................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................GTGTGTGTGGAAGGAGAG................................................................................................................................................ | 18 | 3 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTGTGTGGCTGCG........................................................................................................................................................................................... | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| ..............................................................................................................................................................................................GTGTTTGGGAGGCAGGC........................................... | 17 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - |
| AGTGAGGCACTTCGCTGGAGTGGTGGCGCAGCGCTCTCTGCCCGCGGTAGGTGTGTGGCTGCGGCGAGCCTTTTCCGGCTCTGGGAGTGTGTGTGTGGAAGGAGAGTCCTCGGGGTGACAGGAGTGTTGGGAGTGAAGGGGCGACTTAACTAGCAGGGGATTCTTCTCGCCCGCCCGGAGTCTCCTCCCTGTGTTTGGGAGGCAGGCGTGGTGGTGGTGGCGGTGGCGGTGGCCCCGGCTTGGCTTTGCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................TCGGGGTGACAGGAcca............................................................................................................................... | 17 | cca | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |