| Gene: N6amt2 | ID: uc007udd.1_intron_3_0_chr14_58184922_r.5p | SPECIES: mm9 |
|
|
(4) OTHER.mut |
(2) OVARY |
(1) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| GCCAACCCTCACCCCACCCCCGCACTGTGACGACTGCGCATGCGTCAGTGGTGAGTGGCGGCCACGGAGTGTGGCGGCGGAGGGTCAAGGGATGTTTTGGGTGGGTTCCGAACCGGGTCCATACTGACCCTTGGAGACTTTCCCAGTAGGGGCCTCGTCTCTGCGGGGTCCTTCTTCTTGGACATCTTGAGCCGGAAACAAGTCCTTAGTGGTCCGGTCGGAATGGTGCCTGGGGAAGGGATATATATGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................CGGAGTGTGGCGGCGG.......................................................................................................................................................................... | 16 | 1 | 13.00 | 13.00 | 1.00 | - | 6.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................CGGAGTGTGGCGGCGGAG........................................................................................................................................................................ | 18 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................ACGGAGTGTGGCGGCGGAG........................................................................................................................................................................ | 19 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................GTCGGAATGGTagac................... | 15 | agac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TTGGACATCTTGAGCCGGAAACAAGTC.............................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TAGTGGTCCGGTCGGAATGGTGCCT................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TCCTTAGTGGTCCGGTCGGAATGcg....................... | 25 | cg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................ACGGAGTGTGGCGGCGGAGGGT..................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................TGTGACGACTGCGCATGCGTCAGTGcatt.................................................................................................................................................................................................... | 29 | catt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................CACGGAGTGTGGCGGCGGAGG....................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................GCGGAGGGTCAAGGGATGTTTTG....................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................CGGAGTGTGGCGGCGGAGtgtc.................................................................................................................................................................... | 22 | tgtc | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................................TGGCGGCCACGGAGTGTG................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............ACCCCCGCACTGTGACGACTGCGCAT................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................TCAGTGGTGAGTGGCGGC............................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................GAGGGTCAAGGGATG............................................................................................................................................................ | 15 | 10 | 0.10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCAACCCTCACCCCACCCCCGCACTGTGACGACTGCGCATGCGTCAGTGGTGAGTGGCGGCCACGGAGTGTGGCGGCGGAGGGTCAAGGGATGTTTTGGGTGGGTTCCGAACCGGGTCCATACTGACCCTTGGAGACTTTCCCAGTAGGGGCCTCGTCTCTGCGGGGTCCTTCTTCTTGGACATCTTGAGCCGGAAACAAGTCCTTAGTGGTCCGGTCGGAATGGTGCCTGGGGAAGGGATATATATGC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................GGTTCCGAACCGGGgggc..................................................................................................................................... | 18 | gggc | 12.00 | 0.00 | 7.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................GGTTCCGAACCGgggc....................................................................................................................................... | 16 | gggc | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GGTTCCGAACCGggg....................................................................................................................................... | 15 | ggg | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................GGTTCCGAACCGGgggc...................................................................................................................................... | 17 | gggc | 2.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................GGTTCCGAACCGGggg...................................................................................................................................... | 16 | ggg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................GGTTCCGAACCGGGgggg..................................................................................................................................... | 18 | gggg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................GGTTCCGAACCGGGggg..................................................................................................................................... | 17 | ggg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........CCCACCCCCGCACcggg................................................................................................................................................................................................................................. | 17 | cggg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |