| Gene: Txndc16 | ID: uc007tgh.1_intron_4_0_chr14_45826478_r.5p | SPECIES: mm9 |
|
|
|
(1) OTHER.mut |
(1) OVARY |
(6) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| TAAAAGAAGCTGTCAAGCCTCTCCAGGACTATGGGATTTCAGTTGCAAAGGTAGACAGATATTTATGTTAATAAAATATTAGTGACAGACATTTACAACCCTCTGACCTAAGACTGCATATCTGAAAACACATTCACAACTTTTTCCAAACTGGAAAAAACTGAGTTTATTTTCCTTGCTTTCCTCCCTGAGTTTCGGTAGGAGCACAGGAAGAGCTCCGGTGAGTGTACAGTGGTGCCTGGGGAGAAGA .........................................................................................................(((...((..(((.....(((((...(((((....(((((((.....)))))))..)))))...)))))..)))..))(((...)))....)))................................................... ..................................................................................................99...................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................TGACCTAAGACTGCATATCTGAAAACAC....................................................................................................................... | 28 | 1 | 19.00 | 19.00 | 6.00 | 8.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TCTGACCTAAGACTGCATATCTGAAA........................................................................................................................... | 26 | 1 | 13.00 | 13.00 | 7.00 | 5.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................TGACCTAAGACTGCATATCTGAAAACACA...................................................................................................................... | 29 | 1 | 13.00 | 13.00 | 7.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAAGACTGCATATCTGAAAACACATTC................................................................................................................... | 27 | 1 | 12.00 | 12.00 | 5.00 | 4.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TACAACCCTCTGACCTAAGACTGCATA.................................................................................................................................. | 27 | 1 | 11.00 | 11.00 | 3.00 | 5.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TCTGACCTAAGACTGCATATCTGAAAAC......................................................................................................................... | 28 | 1 | 8.00 | 8.00 | 4.00 | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAAGACTGCATATCTGAAAACACATTCAC................................................................................................................. | 29 | 1 | 6.00 | 6.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TCTGACCTAAGACTGCATATCTGAAAACAC....................................................................................................................... | 30 | 1 | 4.00 | 4.00 | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TAAGACTGCATATCTGAAAACACATTCA.................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................CAGGACTATGGGATTTC.................................................................................................................................................................................................................. | 17 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ..AAAGAAGCTGTCAAGCCTCTCCAGGACT............................................................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TGAGTTTCGGTAGGAGCACAGGAAG..................................... | 25 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................TACAACCCTCTGACCTAAGACTGCATATC................................................................................................................................ | 29 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................TGGGATTTCAGTTGCAAAGGTAGACA................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TACAACCCTCTGACCTAAGACTGCAT................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TACAGTGGTGCCTGGGGAGAAGA | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................TGGGATTTCAGTTGCAAAGGTAGACAGA............................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................CCTTGCTTTCCTCCCTGAGTTTCGata.................................................. | 27 | ata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................TGACCTAAGACTGCATATCTGAAAACt........................................................................................................................ | 27 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TGAGTTTCGGTAGGAGCACAGGAAGggc.................................. | 28 | ggc | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................TCCAGGACTATGGGATTTCAGTTGCA........................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................AGGTAGACAGATATTTATGTTAATAAA............................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................CTCCAGGACTATGGGATTTCAGTTGC............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TCTGACCTAAGACTGCATATCTGAAAACACA...................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................AAGACTGCATATCTGAAAACACATTCACAA............................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................ACTATGGGATTTCAGTTGCAAAGGTAGA................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGACAGATATTTATGTTAATAAAATAT........................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TAGGAGCACAGGAAGAGCTCCGGTG........................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................TGACCTAAGACTGCATATCTGAAAACACAT..................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TGAGTTTCGGTAGGAGCACAGGgg...................................... | 24 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TCTGAAAACACATTCACAACTTTTTCCcaac................................................................................................... | 31 | caac | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TACAACCCTCTGACCTAAGACTGCA.................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TGAGTTTCGGTAGGAGCACAGGAAGA.................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................TTACAACCCTCTGACCTAAGACTGCATATC................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TATGGGATTTCAGTTGCAAAGGTAGA................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................AGAGCTCCGGTGAGTGTACAGTGGTG............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................AAGACTGCATATCTGAAAACACATTCAC................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TGCTTTCCTCCCTGAGTTTCGGTAGGAGC............................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TATGGGATTTCAGTTGCAAAGGTAGACA................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................CAGGACTATGGGATTTCAGTTGCAAAG........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................TTACAACCCTCTGACCTAAGACTGCATA.................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CCTCTGACCTAAGACTGCATATCTGAAA........................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................TGGGATTTCAGTTGCAAAGGT...................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGACCTAAGACTGCATATCTGAAAACA........................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..AAAGAAGCTGTCAAGCCTCTCCAGGACTATG......................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................GACATTTACAACCCTCTGACCTAAGACTGC..................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................TGGGATTTCAGTTGCAAAGGTAGACAG................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TTCCAAACTGGAAAAAACTGAGTTTATT............................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..AAAGAAGCTGTCAAGCCTCTCCAGGACTAT.......................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| TAAAAGAAGCTGTCAAGCCTCTCCAGGACTATGGGATTTCAGTTGCAAAGGTAGACAGATATTTATGTTAATAAAATATTAGTGACAGACATTTACAACCCTCTGACCTAAGACTGCATATCTGAAAACACATTCACAACTTTTTCCAAACTGGAAAAAACTGAGTTTATTTTCCTTGCTTTCCTCCCTGAGTTTCGGTAGGAGCACAGGAAGAGCTCCGGTGAGTGTACAGTGGTGCCTGGGGAGAAGA .........................................................................................................(((...((..(((.....(((((...(((((....(((((((.....)))))))..)))))...)))))..)))..))(((...)))....)))................................................... ..................................................................................................99...................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|