| Gene: Grid1 | ID: uc007tbj.1_intron_0_0_chr14_35633493_f.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(15) TESTES |
| CTGGATATGCCAGTGCGTTACGGTGCGGGCCGACTCCATCATCCACATCGGTGAGCTGGGAGAGCAGACGGACCGAGGCTGGGCGGGGGCCACCTAATAGAGCCGATGATGCGCGGAGTCCAAACTTAGCGGCTCCCCGGGCCGAGGGGCTCGGCAGTCGGTGTTCCCCCGAAGGCCCGCGCCGCCCCGCGGAGGAGCTGTGCTCTGGCCGCTCGGCGCTCCTGCGGGCACCTCGCTACTCCCCGGGGCT ...............................................(((((...(((......)))....))))).(((...((((((.((((.....((((((..........((((....))))..)))))).(((((((....))))))).....))))..))))))..))).......................................................................... ..............................................47...............................................................................................................................176........................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037900(GSM510436) testes_rep1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................GTCGGTGTTCCCCCGc.............................................................................. | 16 | c | 96.00 | 71.00 | 73.00 | - | 4.00 | 6.00 | 2.00 | 3.00 | 5.00 | - | - | - | 2.00 | - | - | 1.00 | - |
| ............................................................................................................................................................GTCGGTGTTCCCCCG............................................................................... | 15 | 1 | 71.00 | 71.00 | 56.00 | 6.00 | 3.00 | 1.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GTCGGTGTTCCCCCGcc............................................................................. | 17 | cc | 66.00 | 71.00 | 43.00 | - | 3.00 | 6.00 | 7.00 | 5.00 | 2.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GTCGGTGTTCCCCCGccgg........................................................................... | 19 | ccgg | 47.00 | 71.00 | 10.00 | 21.00 | 8.00 | 1.00 | - | - | 2.00 | 3.00 | - | 2.00 | - | - | - | - | - |
| ............................................................................................................................................................GTCGGTGTTCCCCCGccg............................................................................ | 18 | ccg | 23.00 | 71.00 | 8.00 | 6.00 | 3.00 | - | 3.00 | - | 1.00 | - | - | - | - | 2.00 | - | - | - |
| .............................................................................................................................................................TCGGTGTTCCCCCGccgg........................................................................... | 18 | ccgg | 4.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | 1.00 |
| .............................................................................................................................................................TCGGTGTTCCCCCGc.............................................................................. | 15 | c | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TCGGTGTTCCCCCGcc............................................................................. | 16 | cc | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GTCGGTGTTCCCCCGctgg........................................................................... | 19 | ctgg | 2.00 | 71.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................GTCGGTGTTCCCCCtc.............................................................................. | 16 | tc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................AGGCCCGCGCCGCCtgga............................................................ | 18 | tgga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................TGAGCTGGGAGAGCAcct..................................................................................................................................................................................... | 18 | cct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................GCTCCCCGGGCCGcggt...................................................................................................... | 17 | cggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| CTGGATATGCCAGTGCGTTACGGTGCGGGCCGACTCCATCATCCACATCGGTGAGCTGGGAGAGCAGACGGACCGAGGCTGGGCGGGGGCCACCTAATAGAGCCGATGATGCGCGGAGTCCAAACTTAGCGGCTCCCCGGGCCGAGGGGCTCGGCAGTCGGTGTTCCCCCGAAGGCCCGCGCCGCCCCGCGGAGGAGCTGTGCTCTGGCCGCTCGGCGCTCCTGCGGGCACCTCGCTACTCCCCGGGGCT ...............................................(((((...(((......)))....))))).(((...((((((.((((.....((((((..........((((....))))..)))))).(((((((....))))))).....))))..))))))..))).......................................................................... ..............................................47...............................................................................................................................176........................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037900(GSM510436) testes_rep1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................CCGACTCCATCATCCACAttt........................................................................................................................................................................................................... | 21 | ttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |