| Gene: Ercc6 | ID: uc007szd.1_intron_0_0_chr14_33326786_f.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(8) TESTES |
| ACTGTCTTTCTCAGGACCTTTGTTGTTGTCACTGTGTCTATCTTGGTTAGCTTTTCTTTATCCTCAATTGTTCTTTTTAGAAACTTAATTTTATTAGAAGGTTAGCGCTGCTTTGAGAAACTCATGCATTTAGCATATTTAAGACACTGTATACTGATCAACAACCAAAAGGCTTATCAATGCTTTCTTTTTTTAGATAGTTTGTAGAGGATGTTCCACGAGGAAGTTCCCAACTCCACTCACCCTCAGG ........................................................................................................((..(((..((((...)))).)))....)).(((((((((...(((..........))).....(((((........)))))....)))))))))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................AAACTTAATTTTATTAGAAGGTTAGCGCTGCTTTGAGAAACTCATGCATTTA...................................................................................................................... | 52 | 1 | 37.00 | 37.00 | 37.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TAGTTTGTAGAGGATGTTCCACGAGGAAGT....................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................................................TAGTTTGTAGAGGATGTTCCACGAG............................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TTGTAGAGGATGTTCCACGAGGAAGTT...................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TTGTAGAGGATGTTCCACGAGGAAGT....................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................TTAGATAGTTTGTAGAGGATGTTCCAC............................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................................................................AGAGGATGTTCCACGAGGAAGTTCC.................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ACTGTCTTTCTCAGGACCTTTGTTGTTGTCACTGTGTCTATCTTGGTTAGCTTTTCTTTATCCTCAATTGTTCTTTTTAGAAACTTAATTTTATTAGAAGGTTAGCGCTGCTTTGAGAAACTCATGCATTTAGCATATTTAAGACACTGTATACTGATCAACAACCAAAAGGCTTATCAATGCTTTCTTTTTTTAGATAGTTTGTAGAGGATGTTCCACGAGGAAGTTCCCAACTCCACTCACCCTCAGG ........................................................................................................((..(((..((((...)))).)))....)).(((((((((...(((..........))).....(((((........)))))....)))))))))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) |
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| ................................................................................................................................................................................................................................TCCCAACTCCACTCAtgt........ | 18 | tgt | 2.00 | 0.00 | - | - | - | 1.00 | - | - | - | 1.00 |