| Gene: Anxa11 | ID: uc007sru.1_intron_9_0_chr14_26696894_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(11) TESTES |
| TCCTCTGTGCTACGCACGGACAGATGAGGGGATTGCTGGGGTCTGGGTCTGCAGTGAGCAGAGCCAACAGGCTTCAGCAAACTGGTGCCCCCACTGCCAGGGCCCTGCTCCTTCCCTGTGGGCTCAGATGCTGCCTAGGTGCTCTGAGCCTGGGACCTGGAGGATGCTTGCTGGACACATGCATCTTCCTTCTCCTCCAGGAGCTGTATGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTT ....................................................................................................((..........((((...(((((((((.((.((....)))))))))))))))))...(((((((((.((.......)).))))))))).......)).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................CCTGGGACCTGGAGGATGCTTG................................................................................ | 22 | 3 | 4.00 | 4.00 | 3.33 | - | - | 0.67 | - | - | - | - | - | - | - | - |
| .........................................TCTGGGTCTGCAGTGAGtacg............................................................................................................................................................................................ | 21 | tacg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGCCTGGGACCTGGAGGATGCTTGtt.............................................................................. | 26 | tt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......TGCTACGCACGGACAGATGAGGGGA.......................................................................................................................................................................................................................... | 25 | 3 | 0.67 | 0.67 | - | - | - | - | 0.67 | - | - | - | - | - | - | - |
| ....................................................................................................................................................CCTGGGACCTGGAGGATGCTTGt............................................................................... | 23 | t | 0.67 | 4.00 | - | - | - | - | - | - | 0.33 | - | 0.33 | - | - | - |
| ....................................................................................................................................................CCTGGGACCTGGAGGATGCTTGCTGG............................................................................ | 26 | 3 | 0.33 | 0.33 | - | - | - | - | - | 0.33 | - | - | - | - | - | - |
| ....................................................................................................................................................CCTGGGACCTGGAGGATGCTTag............................................................................... | 23 | ag | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ....................................................................................................................................................CCTGGGACCTGGAGGATGCTT................................................................................. | 21 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| ...............ACGGACAGATGAGGGGATTGCTGG................................................................................................................................................................................................................... | 24 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| TCCTCTGTGCTACGCACGGACAGATGAGGGGATTGCTGGGGTCTGGGTCTGCAGTGAGCAGAGCCAACAGGCTTCAGCAAACTGGTGCCCCCACTGCCAGGGCCCTGCTCCTTCCCTGTGGGCTCAGATGCTGCCTAGGTGCTCTGAGCCTGGGACCTGGAGGATGCTTGCTGGACACATGCATCTTCCTTCTCCTCCAGGAGCTGTATGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTT ....................................................................................................((..........((((...(((((((((.((.((....)))))))))))))))))...(((((((((.((.......)).))))))))).......)).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ..............................................................................................................CTTCCCTGTGGGCTCAGATGCTGCCTA................................................................................................................. | 27 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | 0.33 | - | - | - | - |