| Gene: Nkiras1 | ID: uc007sht.1_intron_1_0_chr14_19109321_f.5p | SPECIES: mm9 |
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(4) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| TGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGTAAGATTATCTTTCTTAGTTCCTTTCTAGATTCTGAAGCTGGTGGAAGGTGCTTGTTGCTCATACTAACTGGTGTAAAAGAGCAAGTAAGGACAAGTAACTTGGGTTCTGCTGACATCCAGCAGTGCTTGCTAAATGTTCTGTACATGTTAGAAACAAATGGTAAGTAGAAATGAGTCGTATGAAAATGGGATCCTGTG ...................................................((((...((((((((((((....(((........)))))))).))))))).))))................................................................................................................................................ ..............................................47...........................................................108............................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
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| .............................................................................TAGATTCTGAAGCTGGTGGAAGGTGC................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - |
| ...................................................TAAGATTATCTTTCTTAGTTCCTTTCT............................................................................................................................................................................ | 27 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................TAGATTCTGAAGCTGGTGGAAGGTGCT.................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................TTCTAGATTCTGAAGCTGGTGGAAGGT..................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................AGAGCAAGTAAGGACAAGTAACTTGGGT............................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GGTGTAAAAGAGCAAGTAAGGACAAGTA..................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................TCTGAAGCTGGTGGAAGGTGCTTGTT.............................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................AAAGAGCAAGTAAGGACAAGTAACTT................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................CTAGATTCTGAAGCTGGTGGAAGGTGCTTGT............................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................ACTGGTGTAAAAGAGCAAGTAAGGACA......................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................CTAGATTCTGAAGCTGGTGGAAGGTG.................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................TAGATTCTGAAGCTGGTGG.......................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................................TCTGTACATGTTAGAAACAAATGGTAAG................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................TTCTGTACATGTTAGAAACAAATGGga................................... | 27 | ga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGGTAAGTAGAAATGAGTCGTATGAAA............. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................AATGGTAAGTAGAAA........................... | 15 | 13 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | - | 0.08 |
| TGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGTAAGATTATCTTTCTTAGTTCCTTTCTAGATTCTGAAGCTGGTGGAAGGTGCTTGTTGCTCATACTAACTGGTGTAAAAGAGCAAGTAAGGACAAGTAACTTGGGTTCTGCTGACATCCAGCAGTGCTTGCTAAATGTTCTGTACATGTTAGAAACAAATGGTAAGTAGAAATGAGTCGTATGAAAATGGGATCCTGTG ...................................................((((...((((((((((((....(((........)))))))).))))))).))))................................................................................................................................................ ..............................................47...........................................................108............................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
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