| Gene: Il3ra | ID: uc007sgm.1_intron_10_0_chr14_15187588_f | SPECIES: mm9 |
|
|
(5) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| GCCTGTGCCCACCCATTCCACGCCTGCGCCTGCCCTTGGCAGGGGAGATGGTGAGGGGGCAGTGCCTGGCATGTGGGGGCAGTGCCCAGGGTGTGGGGGTGGGCCCGGGGGTGGGGCATCAGGGGAGGGATCTGGGCCTCAGAGGGGACAGGAAGTGACACTGGGGGTCAGGAAATGACTGTGGAAGAGGAAGTGACCACAGAGGGACAGGAAGTGACTTTGAGGGGACAGGAAGAGATGTCATTGATACATGAAGTAACTCTGGTGGGACAGAAAGTGACCATGGGGGGACAGGAAGTAACACTAGGTGGAATGACTGACAGGTGGGCGTATCCCCTCTCTGCAGGTCGTGTGGGAACCAGCTCTTGAAGACTGCGAGGTGACGCCTGTGACAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................................................................................................................................................................AGACTGCGAGGTGACGCCTG....... | 20 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................TAGGTGGAATGACTGACAGGTGGGC................................................................... | 25 | 1 | 7.00 | 7.00 | - | - | 1.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TGATACATGAAGTAACTCTGGTGGGAC............................................................................................................................. | 27 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................TGGAATGACTGACAGGTGGGCGTATC.............................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TGAAGACTGCGAGGTGACGCCTGT...... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................TACATGAAGTAACTCTGGTGGGAC............................................................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................GGAAATGACTGTGGAAGAGGAAGTGA........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................TGCAGGTCGTGTGGGAACCAGCTCTTG............................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................AGGTGGAATGACTGACAGGTG...................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................TCTGCAGGTCGTGTGGGAACCAGCTCT.............................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................TGGGGGGACAGGAAGTAACACTAGGT....................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................TTGAAGACTGCGAGGTGACGCCTGT...... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TGAAGACTGCGAGGTGACGCCTGTG..... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................................................GGAAGAGATGTCATTGATACATGAAG............................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TGAAGACTGCGAGGTGACGCCTGTGA.... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................CAGAGGGGACAGGAAGTGACA............................................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................CAGGAAGTGACTTTGAGGGGACAGG.................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................CAGGAAGTAACACTAGGTGGAATGACTGAC........................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| GCCTGTGCCCACCCATTCCACGCCTGCGCCTGCCCTTGGCAGGGGAGATGGTGAGGGGGCAGTGCCTGGCATGTGGGGGCAGTGCCCAGGGTGTGGGGGTGGGCCCGGGGGTGGGGCATCAGGGGAGGGATCTGGGCCTCAGAGGGGACAGGAAGTGACACTGGGGGTCAGGAAATGACTGTGGAAGAGGAAGTGACCACAGAGGGACAGGAAGTGACTTTGAGGGGACAGGAAGAGATGTCATTGATACATGAAGTAACTCTGGTGGGACAGAAAGTGACCATGGGGGGACAGGAAGTAACACTAGGTGGAATGACTGACAGGTGGGCGTATCCCCTCTCTGCAGGTCGTGTGGGAACCAGCTCTTGAAGACTGCGAGGTGACGCCTGTGACAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................................................AACTCTGGTGGGACgcca............................................................................................................................. | 18 | gcca | 4.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................AGACTGCGAGGTGACGCCTGTGACA.. | 25 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................AACTCTGGTGGGACAgcca............................................................................................................................ | 19 | gcca | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................CAGGAAGTAACACTAGGTGGAATGACTG............................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................AACTCTGGTGGGACAGAgcca.......................................................................................................................... | 21 | gcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................AGGTCGTGTGGGAACCAGCTCTTGAA.......................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................GTAACTCTGGTGGGACAGAAAGTGACCA................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................GGACAGAAAGTGACCA................................................................................................................. | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |