(7)
OTHER.mut
(4)
PIWI.ip
(2)
PIWI.mut
(1)
TDRD1.ip
(28)
TESTES

Sense strand
TCAGGAAGAGCAGTGAGCATTCTTAACCACTGAACTGTCTCCAGCCCAAGGTGTGCCTTTCCTTCCAGCACTTGACAGACCGAAGCAGACAACTTCTGGGAGTTTGAAGCCAGCAAATTTCAGGGCAAGACCTTGTCCCAAAATGTGTGTGTGACAGAAGTGTGTGTGAGAGTGTGTGTGTGTGTACTCAGAAATTCTGCATTTTAATCTCTTTAAGGACTATGTCTTATTTACCTTGATCTCTTCAAGT
......................................................................................................((((..((..(((.((((..((((((....))))))..)))).)))..))..))))..........(((((.((.(((....))).))...)))))....................................................
....................................................................................................101................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
..............................................................TTCCAGCACTTGACAGACCGAAGCAGA................................................................................................................................................................. 27 1 6.00 6.00 1.00 - - - - - 1.00 1.00 - - - 2.00 - - - - - - - - - - 1.00 - - - - -
.......................TAACCACTGAACTGTCTCCAGCCCAAGGTGTGCCTTTCCTTCCAGCACTTGA............................................................................................................................................................................... 52 1 5.00 5.00 - 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
....................TCTTAACCACTGAACTGTCTCCAGCCCAAGGTGTGCCTTTCCTTCCAGCACT.................................................................................................................................................................................. 52 1 5.00 5.00 - 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................TTCCAGCACTTGACAGACCGAAGCAGACAA.............................................................................................................................................................. 30 1 4.00 4.00 - - - - 1.00 - - - - - - - 1.00 - - - - 1.00 - - 1.00 - - - - - - -
.CAGGAAGAGCAGTGAGCATTCT................................................................................................................................................................................................................................... 22 1 4.00 4.00 - - - - - - - - 4.00 - - - - - - - - - - - - - - - - - - -
..............................................................TTCCAGCACTTGACAGACCGAAGCAGACAACT............................................................................................................................................................ 32 1 3.00 3.00 - - - - 1.00 - - - - - - - - - - - - 1.00 1.00 - - - - - - - - -
...............AGCATTCTTAACCACTGAACTGTCTCC................................................................................................................................................................................................................ 27 1 3.00 3.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - 1.00 - -
........................................................................TGACAGACCGAAGCAGACAACTTCTGG....................................................................................................................................................... 27 1 3.00 3.00 - - - - - - 1.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - -
.......................TAACCACTGAACTGTCTCCAGCCCAAGGTGT.................................................................................................................................................................................................... 31 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................TGGGAGTTTGAAGCCAGCAAATTTCAG............................................................................................................................... 27 1 2.00 2.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
..............................................................TTCCAGCACTTGACAGACCGAAGCAG.................................................................................................................................................................. 26 1 2.00 2.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........................................................TTCCTTCCAGCACTTGACAGACCGAA...................................................................................................................................................................... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................TGGGAGTTTGAAGCCAGCAAATTTCAGGGC............................................................................................................................ 30 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................TGAAGCCAGCAAATTTCAGGGCAAGA........................................................................................................................ 26 1 2.00 2.00 - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - -
...............................................................TCCAGCACTTGACAGACCGAAGCAGA................................................................................................................................................................. 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................TGACAGACCGAAGCAGACAACTTCTGGGA..................................................................................................................................................... 29 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................TAACCACTGAACTGTCTCCAGCCCAAGG....................................................................................................................................................................................................... 28 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..AGGAAGAGCAGTGAGCATTCTTA................................................................................................................................................................................................................................. 23 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..............................TGAACTGTCTCCAGCCCAAGGTGTGCCT................................................................................................................................................................................................ 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................TTCCTTCCAGCACTTGACAGACCGAAGCAGt................................................................................................................................................................. 31 t 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
................................................................................................TGGGAGTTTGAAGCCAGCAAATTTCAGG.............................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
....GAAGAGCAGTGAGCATTCTTAACCACTG.......................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................TTCCAGCACTTGACAGACCGAAGCAGACA............................................................................................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................TCCTTCCAGCACTTGACAGACCGAAGCA................................................................................................................................................................... 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................AACCACTGAACTGTCTCCAGCCCAAGGaaa.................................................................................................................................................................................................... 30 aaa 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..AGGAAGAGCAGTGAGCATTCT................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..............................................................TTCCAGCACTTGACAGACCGAAGC.................................................................................................................................................................... 24 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................GACAACTTCTGGGAGTTTGAAGCCAGC........................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...........................................................TCCTTCCAGCACTTGACAGACCGAAGCAtt................................................................................................................................................................. 30 tt 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................TGACAGACCGAAGCAGACAACTTC.......................................................................................................................................................... 24 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................CACTGAACTGTCTCCAGCCCAAGGTGT.................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
...................................................................................AGCAGACAACTTCTGGGAGTTTGAA.............................................................................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................TTCTTAACCACTGAACTGTCTCCAGCCCAt......................................................................................................................................................................................................... 30 t 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................ACCACTGAACTGTCTCCAGCCCAAGttgt.................................................................................................................................................................................................... 29 ttgt 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................TGACAGACCGAAGCAGACAACTTCTGGGAG.................................................................................................................................................... 30 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................TAACCACTGAACTGTCTCCAG.............................................................................................................................................................................................................. 21 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................TGACAGACCGAAGCAGACAACTTCTa........................................................................................................................................................ 26 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................TCCTTCCAGCACTTGACAGACCGAAGCAG.................................................................................................................................................................. 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................CAGACAACTTCTGGGAcag.................................................................................................................................................. 19 cag 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
........................................................................TGACAGACCGAAGCAGACAACTTCTGGGAGTT.................................................................................................................................................. 32 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................TGGGAGTTTGAAGCCAGCAAATTTCAGt.............................................................................................................................. 28 t 1.00 2.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................................CACTTGACAGACCGAAGCAGACAACTTt.......................................................................................................................................................... 28 t 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................TCCAGCACTTGACAGACCGAAGCAG.................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................TGGGAGTTTGAAGCCAGCAAATTTCA................................................................................................................................ 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................GCATTCTTAACCACTGAACTGTCTCCA............................................................................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................TTGACAGACCGAAGCAGACAACTTCTGGGA..................................................................................................................................................... 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................ACCACTGAACTGTCTCCAGCCCAAGGTGT.................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
....................TCTTAACCACTGAACTGTCTCCAGCCCAAGt....................................................................................................................................................................................................... 31 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................CACTTGACAGACCGAAGCAGAtt............................................................................................................................................................... 23 tt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................TGGGAGTTTGAAGCCAGCAAATTTCAGGtgt........................................................................................................................... 31 tgt 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................ACTGAACTGTCTCCAGCCCAAGGTGTGCC................................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................TTCCTTCCAGCACTTGACAGACCGAAGCA................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
....................TCTTAACCACTGAACTGTCTCCAGC............................................................................................................................................................................................................. 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................CAGCACTTGACAGACCGAAGCAGACAA.............................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...............AGCATTCTTAACCACTGAACTGTCTCCAG.............................................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.......................TAACCACTGAACTGTCTCCAGCCCAAGGT...................................................................................................................................................................................................... 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................TTGACAGACCGAAGCAGACAACTTCTGGGAGT................................................................................................................................................... 32 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................TGAAGCCAGCAAATTTCAGGacg........................................................................................................................... 23 acg 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................GAAGCAGACAACTTCTGGG...................................................................................................................................................... 19 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................TAACCACTGAACTGTCTCCAGCCCA.......................................................................................................................................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................TTTCCTTCCAGCACTTGACAGACCGAAGCA................................................................................................................................................................... 30 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................TTCCAGCACTTGACAGACCGAAGCAGACAt.............................................................................................................................................................. 30 t 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................TGGGAGTTTGAAGCCAGCAAATTTCAGGGCttt......................................................................................................................... 33 ttt 1.00 2.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................TTCCTTCCAGCACTTGACAGACCGAAG..................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..................................................................AGCACTTGACAGACCGAAGC.................................................................................................................................................................... 20 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
................GCATTCTTAACCACTGAACTGTCTCCAGCt............................................................................................................................................................................................................ 30 t 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
TCAGGAAGAGCAGTGAGCATTCTTAACCACTGAACTGTCTCCAGCCCAAGGTGTGCCTTTCCTTCCAGCACTTGACAGACCGAAGCAGACAACTTCTGGGAGTTTGAAGCCAGCAAATTTCAGGGCAAGACCTTGTCCCAAAATGTGTGTGTGACAGAAGTGTGTGTGAGAGTGTGTGTGTGTGTACTCAGAAATTCTGCATTTTAATCTCTTTAAGGACTATGTCTTATTTACCTTGATCTCTTCAAGT
......................................................................................................((((..((..(((.((((..((((((....))))))..)))).)))..))..))))..........(((((.((.(((....))).))...)))))....................................................
....................................................................................................101................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
...................................................................ACTTGACAGACCGcg........................................................................................................................................................................ 15 cg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -