| Gene: Ppap2a | ID: uc007rwq.1_intron_3_0_chr13_113649910_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(8) TESTES |
| TTGTCTAAATGCAAGTCGCTGGGGCAATGCTGTTAGGGACAGGGTGTGTTGCTTTAAAGTACTTGCCTAAAGTTTTATTTCATCTGTAAAAATATTGATGCTCTTAATGTCAACACTTTAGAAGTGTGCTGGGTGATAGTCAAGTTTTCAACTGGCTTCTTAAATCAAGTATTCTCTCTTCCACCCCCTTTTTCTGTTAGCTTTATCTTCAAGCCAGGATGAAGGGAGACTGGGCAAGACTCTTACGACC ................................................................................................................(((((.....)))))...(((((..((((.(((.....))))))).........(((........))).)))))................................................................ ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................ACTTTAGAAGTGTGCTGGGTGATAGTCAAGTTTTCAACTGGCTTCTTAAATC.................................................................................... | 52 | 1 | 35.00 | 35.00 | 35.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................GATGAAGGGAGACTGGGCAAGACTCTTACGA.. | 31 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ..........................ATGCTGTTAGGGACAcgtt............................................................................................................................................................................................................. | 19 | cgtt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................TTCAAGCCAGGATGAAGGGAGACTG.................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 |
| TTGTCTAAATGCAAGTCGCTGGGGCAATGCTGTTAGGGACAGGGTGTGTTGCTTTAAAGTACTTGCCTAAAGTTTTATTTCATCTGTAAAAATATTGATGCTCTTAATGTCAACACTTTAGAAGTGTGCTGGGTGATAGTCAAGTTTTCAACTGGCTTCTTAAATCAAGTATTCTCTCTTCCACCCCCTTTTTCTGTTAGCTTTATCTTCAAGCCAGGATGAAGGGAGACTGGGCAAGACTCTTACGACC ................................................................................................................(((((.....)))))...(((((..((((.(((.....))))))).........(((........))).)))))................................................................ ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................TCCACCCCCTTTTcga.......................................................... | 16 | cga | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................TGTCAACACTTTAgtgc.................................................................................................................................. | 17 | gtgc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................AAGTATTCTCTCTTCcga..................................................................... | 18 | cga | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................AAGTATTCTCTCTTCagca..................................................................... | 19 | agca | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - |