| Gene: Ddx4 | ID: uc007rwn.1_intron_17_0_chr13_113426254_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(11) TESTES |
| TGATTTCATGAGAAGTGGGTTTCCTTCTGGAAGAAGTTTAGGAAGCAGAGGTAAGCGCCATCTTTGTTTAGTCATCTGAACTGTTGAATAATGGCACAGGGGCTTGGATTTGGTGCAAAGCTATAAGTCTGCTATAACTTAGTGGATAATAGATTTTGAGTTAATTTTTTGTGTGTGTGTGATTTTGTTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAACTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGCGCCATCTTTGTTTAGTCATCTGAACTGTTGAATAATGGCACAGGGG.................................................................................................................................................... | 52 | 1 | 134.00 | 134.00 | 134.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................TGGAAGAAGTTTAGGAAGCAGAGata..................................................................................................................................................................................................... | 26 | ata | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................................................................................................TTTTTGAGACAGGGTTTCTCTGTGggat.. | 28 | ggat | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................TTCTGGAAGAAGTTTAGGAAG............................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................ATTTGGTGCAAAGCTATAAGTCTGCTATAA................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................................................................TTTTGAGACAGGGTTTCTCTGTGgggt.. | 27 | gggt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................TAGTGGATAATAGATTTTGAGTTAATT.................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................CTGGAAGAAGTTTAGGAAGCAG.......................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................TCTGGAAGAAGTTTAGGAA.............................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................TTCTGGAAGAAGTTTAGGAAGCAGAGa....................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TTTTTGAGACAGGGTTTCTCTGTGggt... | 27 | ggt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TTTTTGAGACAGGGTTTCTCTGTGgtgc.. | 28 | gtgc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......CATGAGAAGTGGGTTTCCTTCTGGAAGAAGTT.................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| TGATTTCATGAGAAGTGGGTTTCCTTCTGGAAGAAGTTTAGGAAGCAGAGGTAAGCGCCATCTTTGTTTAGTCATCTGAACTGTTGAATAATGGCACAGGGGCTTGGATTTGGTGCAAAGCTATAAGTCTGCTATAACTTAGTGGATAATAGATTTTGAGTTAATTTTTTGTGTGTGTGTGATTTTGTTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAACTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................CTTAGTGGATAATAccgt................................................................................................... | 18 | ccgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |